Variant report

Variant	rs72998964
Chromosome Location	chr6:150723408-150723409
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs12201055	0.86[ASN][1000 genomes]
rs12214529	1.00[ASN][1000 genomes]
rs58987147	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6925386	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6933986	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs72998970	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs72998974	0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs72998993	0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9478731	0.88[ASN][1000 genomes]
rs9478732	0.88[ASN][1000 genomes]
rs9480387	0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv464078	chr6:150720439-150729878	Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv604849	chr6:150720439-150729878	Weak transcription Flanking Active TSS Enhancers Strong transcription Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:150719600-150723800	Weak transcription	Fetal Heart	heart
2	chr6:150721800-150729800	Weak transcription	Liver	Liver
3	chr6:150722400-150724400	Weak transcription	Aorta	Aorta
4	chr6:150723400-150723800	Enhancers	K562	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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