The 2.0 version of rSNPBase

Variant report

Variant rs73020507
Chromosome Location chr1:165696643-165696644
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:165685200-165721600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
2 chr1:165685600-165705200 Weak transcription Cortex derived primary cultured neurospheres brain
3 chr1:165687600-165696800 Weak transcription GM12878-XiMat blood
4 chr1:165687600-165705000 Weak transcription Thymus Thymus
5 chr1:165687600-165706000 Weak transcription HepG2 liver
6 chr1:165687600-165709800 Weak transcription HUES48 Cell Line embryonic stem cell
7 chr1:165687600-165709800 Weak transcription HUVEC blood vessel
8 chr1:165687600-165737600 Weak transcription ES-WA7 Cell Line embryonic stem cell
9 chr1:165687800-165707000 Weak transcription ES-I3 Cell Line embryonic stem cell
10 chr1:165687800-165709800 Weak transcription iPS-18 Cell Line embryonic stem cell
11 chr1:165690200-165710800 Weak transcription Pancreatic Islets Pancreatic Islet
12 chr1:165691000-165710000 Weak transcription Fetal Kidney kidney
13 chr1:165692200-165697000 Weak transcription Lung lung
14 chr1:165692600-165697200 Weak transcription Fetal Intestine Small intestine
15 chr1:165693200-165705600 Weak transcription Ovary ovary
16 chr1:165693400-165709600 Weak transcription Colon Smooth Muscle Colon
17 chr1:165693800-165697600 Weak transcription Stomach Mucosa stomach
18 chr1:165693800-165701000 Strong transcription Rectal Mucosa Donor 31 rectum
19 chr1:165693800-165706000 Weak transcription Sigmoid Colon Sigmoid Colon
20 chr1:165694000-165706000 Weak transcription Rectal Smooth Muscle rectum
21 chr1:165694000-165708600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr1:165694000-165709800 Weak transcription Primary T helper naive cells from peripheral blood blood
23 chr1:165694000-165709800 Weak transcription Brain Substantia Nigra brain
24 chr1:165694000-165711800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
25 chr1:165694200-165696800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
26 chr1:165694200-165705000 Weak transcription Left Ventricle heart
27 chr1:165694200-165709800 Weak transcription Colonic Mucosa Colon
28 chr1:165694200-165709800 Weak transcription Pancreas Pancrea
29 chr1:165694200-165709800 Weak transcription Spleen Spleen
30 chr1:165694200-165710000 Weak transcription NHEK skin
31 chr1:165694200-165721600 Weak transcription Aorta Aorta
32 chr1:165694200-165721600 Weak transcription Esophagus oesophagus
33 chr1:165694400-165696800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
34 chr1:165694400-165697400 Strong transcription Stomach Smooth Muscle stomach
35 chr1:165694400-165698000 Strong transcription Placenta Placenta
36 chr1:165694400-165699200 Strong transcription Liver Liver
37 chr1:165694400-165705800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
38 chr1:165694400-165721600 Strong transcription Primary T helper cells fromperipheralblood blood
39 chr1:165694600-165697400 Strong transcription Skeletal Muscle Female skeletal muscle
40 chr1:165694600-165697400 Strong transcription NH-A brain
41 chr1:165694600-165697600 Strong transcription Primary T regulatory cells fromperipheralblood blood
42 chr1:165694600-165698000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr1:165694600-165699800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
44 chr1:165694600-165701600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr1:165694600-165709800 Weak transcription Placenta Amnion Placenta Amnion
46 chr1:165694600-165711000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr1:165694600-165711000 Weak transcription Primary T killer naive cells fromperipheralblood blood
48 chr1:165694600-165736800 Strong transcription Monocytes-CD14+_RO01746 blood
49 chr1:165694800-165697400 Strong transcription Breast Myoepithelial Primary Cells Breast
50 chr1:165694800-165697400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015