The 2.0 version of rSNPBase

Variant report

Variant rs73020529
Chromosome Location chr1:165705042-165705043
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:165685200-165721600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
2 chr1:165685600-165705200 Weak transcription Cortex derived primary cultured neurospheres brain
3 chr1:165687600-165706000 Weak transcription HepG2 liver
4 chr1:165687600-165709800 Weak transcription HUES48 Cell Line embryonic stem cell
5 chr1:165687600-165709800 Weak transcription HUVEC blood vessel
6 chr1:165687600-165737600 Weak transcription ES-WA7 Cell Line embryonic stem cell
7 chr1:165687800-165707000 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr1:165687800-165709800 Weak transcription iPS-18 Cell Line embryonic stem cell
9 chr1:165690200-165710800 Weak transcription Pancreatic Islets Pancreatic Islet
10 chr1:165691000-165710000 Weak transcription Fetal Kidney kidney
11 chr1:165693200-165705600 Weak transcription Ovary ovary
12 chr1:165693400-165709600 Weak transcription Colon Smooth Muscle Colon
13 chr1:165693800-165706000 Weak transcription Sigmoid Colon Sigmoid Colon
14 chr1:165694000-165706000 Weak transcription Rectal Smooth Muscle rectum
15 chr1:165694000-165708600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr1:165694000-165709800 Weak transcription Primary T helper naive cells from peripheral blood blood
17 chr1:165694000-165709800 Weak transcription Brain Substantia Nigra brain
18 chr1:165694000-165711800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
19 chr1:165694200-165709800 Weak transcription Colonic Mucosa Colon
20 chr1:165694200-165709800 Weak transcription Pancreas Pancrea
21 chr1:165694200-165709800 Weak transcription Spleen Spleen
22 chr1:165694200-165710000 Weak transcription NHEK skin
23 chr1:165694200-165721600 Weak transcription Aorta Aorta
24 chr1:165694200-165721600 Weak transcription Esophagus oesophagus
25 chr1:165694400-165705800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
26 chr1:165694400-165721600 Strong transcription Primary T helper cells fromperipheralblood blood
27 chr1:165694600-165709800 Weak transcription Placenta Amnion Placenta Amnion
28 chr1:165694600-165711000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr1:165694600-165711000 Weak transcription Primary T killer naive cells fromperipheralblood blood
30 chr1:165694600-165736800 Strong transcription Monocytes-CD14+_RO01746 blood
31 chr1:165694800-165709800 Weak transcription Small Intestine intestine
32 chr1:165695600-165708600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr1:165695600-165709800 Weak transcription Brain Angular Gyrus brain
34 chr1:165695800-165705400 Weak transcription Fetal Lung lung
35 chr1:165695800-165712000 Weak transcription Psoas Muscle Psoas
36 chr1:165696000-165709800 Weak transcription HUES6 Cell Line embryonic stem cell
37 chr1:165696000-165721600 Weak transcription Gastric stomach
38 chr1:165696400-165709200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
39 chr1:165696600-165706800 Weak transcription Fetal Heart heart
40 chr1:165696800-165709800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
41 chr1:165696800-165709800 Weak transcription Brain Germinal Matrix brain
42 chr1:165696800-165709800 Weak transcription NHLF lung
43 chr1:165697200-165709800 Weak transcription iPS-20b Cell Line embryonic stem cell
44 chr1:165697200-165710400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
45 chr1:165697400-165706000 Weak transcription Fetal Brain Female brain
46 chr1:165697400-165708400 Weak transcription Brain Hippocampus Middle brain
47 chr1:165697400-165709000 Weak transcription Stomach Smooth Muscle stomach
48 chr1:165697400-165709600 Weak transcription Brain Cingulate Gyrus brain
49 chr1:165697400-165709800 Weak transcription HUES64 Cell Line embryonic stem cell
50 chr1:165697400-165709800 Weak transcription Brain Inferior Temporal Lobe brain

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Last update: Aug 31, 2015