The 2.0 version of rSNPBase

Variant report

Variant rs73027407
Chromosome Location chr1:173986759-173986760
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:173958600-173987200 Weak transcription Gastric stomach
2 chr1:173962000-173988400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
3 chr1:173962200-173989000 Weak transcription Fetal Kidney kidney
4 chr1:173962200-173989600 Weak transcription H1 Cell Line embryonic stem cell
5 chr1:173962200-173989600 Weak transcription Aorta Aorta
6 chr1:173962200-173989800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr1:173962200-173990400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr1:173962400-173987800 Weak transcription HUES48 Cell Line embryonic stem cell
9 chr1:173962600-173988400 Weak transcription HUES64 Cell Line embryonic stem cell
10 chr1:173962600-173988600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr1:173962600-173989400 Weak transcription HUES6 Cell Line embryonic stem cell
12 chr1:173962800-173989800 Weak transcription Placenta Placenta
13 chr1:173965000-173989600 Weak transcription Fetal Thymus thymus
14 chr1:173966200-173989800 Weak transcription Fetal Muscle Leg muscle
15 chr1:173966400-173987800 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr1:173966400-173989600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
17 chr1:173966400-173989800 Weak transcription Esophagus oesophagus
18 chr1:173967800-173987600 Weak transcription Brain Germinal Matrix brain
19 chr1:173968400-173987200 Weak transcription Fetal Intestine Large intestine
20 chr1:173971200-173988400 Weak transcription iPS-20b Cell Line embryonic stem cell
21 chr1:173975200-173987200 Weak transcription NHLF lung
22 chr1:173975400-173987200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr1:173976600-173990000 Weak transcription H9 Cell Line embryonic stem cell
24 chr1:173977200-173989200 Weak transcription NH-A brain
25 chr1:173977800-173987200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr1:173977800-173988400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr1:173978600-173989200 Weak transcription Fetal Adrenal Gland Adrenal Gland
28 chr1:173978800-173990200 Weak transcription Spleen Spleen
29 chr1:173979000-173987000 Weak transcription Primary B cells from cord blood blood
30 chr1:173979000-173987000 Weak transcription Primary hematopoietic stem cells blood
31 chr1:173979000-173987800 Weak transcription Right Atrium heart
32 chr1:173979400-173987000 Weak transcription Primary neutrophils fromperipheralblood blood
33 chr1:173979400-173989200 Weak transcription iPS-18 Cell Line embryonic stem cell
34 chr1:173979800-173989600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
35 chr1:173981200-173987600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr1:173981400-173987000 Weak transcription Lung lung
37 chr1:173981400-173987600 Weak transcription Primary hematopoietic stem cells short term culture blood
38 chr1:173981400-173989800 Weak transcription Pancreas Pancrea
39 chr1:173983000-173989600 Enhancers Liver Liver
40 chr1:173983200-173987200 Weak transcription Psoas Muscle Psoas
41 chr1:173983200-173988400 Weak transcription NHEK skin
42 chr1:173983400-173987800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
43 chr1:173983600-173987800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
44 chr1:173984000-173989600 Enhancers Primary monocytes fromperipheralblood blood
45 chr1:173984400-173987000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr1:173984600-173987800 Weak transcription Rectal Mucosa Donor 29 rectum
47 chr1:173984800-173988400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
48 chr1:173984800-173989600 Enhancers Primary T regulatory cells fromperipheralblood blood
49 chr1:173985200-173987000 Weak transcription Left Ventricle heart
50 chr1:173985200-173987200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015