The 2.0 version of rSNPBase

Variant report

Variant rs73043760
Chromosome Location chr3:24406863-24406864
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:24360400-24418000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr3:24394000-24407800 Weak transcription Pancreas Pancrea
3 chr3:24394000-24407800 Weak transcription Stomach Smooth Muscle stomach
4 chr3:24394000-24431400 Weak transcription Gastric stomach
5 chr3:24398200-24411800 Weak transcription Psoas Muscle Psoas
6 chr3:24401400-24411800 Weak transcription Left Ventricle heart
7 chr3:24402400-24407800 Enhancers Breast Myoepithelial Primary Cells Breast
8 chr3:24403000-24408800 Weak transcription Aorta Aorta
9 chr3:24403600-24408000 Enhancers Hela-S3 cervix
10 chr3:24403800-24410400 Enhancers Fetal Intestine Small intestine
11 chr3:24404400-24410400 Enhancers Stomach Mucosa stomach
12 chr3:24404400-24410800 Enhancers Fetal Intestine Large intestine
13 chr3:24404800-24410200 Enhancers HepG2 liver
14 chr3:24404800-24410400 Enhancers Rectal Mucosa Donor 31 rectum
15 chr3:24405000-24407800 Weak transcription Small Intestine intestine
16 chr3:24405000-24408600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr3:24405400-24410200 Enhancers Duodenum Mucosa Duodenum
18 chr3:24405800-24407000 Weak transcription NHLF lung
19 chr3:24406000-24407200 Enhancers NH-A brain
20 chr3:24406000-24407400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr3:24406200-24407000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr3:24406200-24407400 Weak transcription Fetal Kidney kidney
23 chr3:24406200-24407400 Enhancers HUVEC blood vessel
24 chr3:24406200-24407800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr3:24406200-24409000 Enhancers Colon Smooth Muscle Colon
26 chr3:24406200-24409200 Weak transcription Pancreatic Islets Pancreatic Islet
27 chr3:24406400-24407000 Enhancers Duodenum Smooth Muscle Duodenum
28 chr3:24406400-24407200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr3:24406400-24407400 Enhancers Muscle Satellite Cultured Cells --
30 chr3:24406400-24407600 Enhancers HSMMtube muscle
31 chr3:24406400-24408000 Enhancers NHDF-Ad bronchial
32 chr3:24406600-24407000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr3:24406600-24407000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr3:24406600-24407000 Enhancers Brain Angular Gyrus brain
35 chr3:24406600-24407000 Enhancers Brain Cingulate Gyrus brain
36 chr3:24406600-24407000 Enhancers Rectal Mucosa Donor 29 rectum
37 chr3:24406600-24407000 Enhancers Sigmoid Colon Sigmoid Colon
38 chr3:24406600-24407000 Enhancers HSMM muscle
39 chr3:24406600-24407000 Enhancers K562 blood
40 chr3:24406600-24407000 Flanking Active TSS NHEK skin
41 chr3:24406600-24407200 Enhancers ES-I3 Cell Line embryonic stem cell
42 chr3:24406600-24407200 Enhancers Primary hematopoietic stem cells short term culture blood
43 chr3:24406600-24407200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr3:24406600-24407200 Enhancers Cortex derived primary cultured neurospheres brain
45 chr3:24406600-24407200 Enhancers Fetal Adrenal Gland Adrenal Gland
46 chr3:24406600-24407200 Enhancers Rectal Smooth Muscle rectum
47 chr3:24406600-24407200 Enhancers Osteobl bone
48 chr3:24406600-24407400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr3:24406600-24407400 Enhancers Adipose Nuclei Adipose
50 chr3:24406600-24407800 Enhancers Skeletal Muscle Male skeletal muscle

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Last update: Aug 31, 2015