Variant report

Variant	rs73077518
Chromosome Location	chr1:210674184-210674185
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs11811274	1.00[EUR][1000 genomes]
rs34362403	1.00[AMR][1000 genomes]
rs55698434	1.00[EUR][1000 genomes]
rs6662350	1.00[EUR][1000 genomes]
rs72749388	1.00[AMR][1000 genomes]
rs73077512	1.00[EUR][1000 genomes]
rs73077514	1.00[EUR][1000 genomes]
rs73077516	1.00[EUR][1000 genomes]
rs73077522	1.00[EUR][1000 genomes]
rs73079518	1.00[EUR][1000 genomes]
rs73079521	1.00[EUR][1000 genomes]
rs73079522	1.00[EUR][1000 genomes]
rs73079536	1.00[EUR][1000 genomes]
rs73079538	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv873147	chr1:210665583-210696806	Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv873148	chr1:210665583-210994339	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Genic enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA miRNA target site	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:210653800-210678800	Weak transcription	HSMM	muscle
2	chr1:210670200-210678800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
3	chr1:210672400-210675200	Enhancers	HSMMtube	muscle
4	chr1:210673200-210678800	Weak transcription	Fetal Muscle Leg	muscle
5	chr1:210673600-210675200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr1:210673600-210679200	Weak transcription	Right Ventricle	heart
7	chr1:210674000-210674400	Strong transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr1:210674000-210674400	ZNF genes & repeats	Aorta	Aorta
9	chr1:210674000-210674400	Enhancers	Right Atrium	heart
10	chr1:210674000-210675000	Enhancers	Fetal Heart	heart
11	chr1:210674000-210678400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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