Variant report
| Variant | rs73081512 |
|---|---|
| Chromosome Location | chr5:41497802-41497803 |
| allele | A/C |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:46)
| rs_ID | r2[population] |
|---|---|
| rs57298536 | 0.81[AFR][1000 genomes] |
| rs57590605 | 0.81[AFR][1000 genomes] |
| rs59447468 | 0.81[AFR][1000 genomes] |
| rs59814375 | 0.81[AFR][1000 genomes] |
| rs60225001 | 0.96[AFR][1000 genomes] |
| rs60682637 | 0.81[AFR][1000 genomes] |
| rs60707515 | 0.81[AFR][1000 genomes] |
| rs6877857 | 0.81[AFR][1000 genomes] |
| rs73079787 | 0.83[AFR][1000 genomes] |
| rs73079796 | 0.96[AFR][1000 genomes] |
| rs73079798 | 0.96[AFR][1000 genomes] |
| rs73079799 | 0.96[AFR][1000 genomes] |
| rs73081505 | 0.96[AFR][1000 genomes] |
| rs73081511 | 0.96[AFR][1000 genomes] |
| rs73081518 | 1.00[AFR][1000 genomes] |
| rs73081519 | 1.00[AFR][1000 genomes] |
| rs73081521 | 1.00[AFR][1000 genomes] |
| rs73081522 | 1.00[AFR][1000 genomes] |
| rs73081525 | 1.00[AFR][1000 genomes] |
| rs73081527 | 1.00[AFR][1000 genomes] |
| rs73081530 | 1.00[AFR][1000 genomes] |
| rs73081536 | 1.00[AFR][1000 genomes] |
| rs73081539 | 0.85[AFR][1000 genomes] |
| rs73081544 | 0.81[AFR][1000 genomes] |
| rs73081549 | 0.81[AFR][1000 genomes] |
| rs73081560 | 0.81[AFR][1000 genomes] |
| rs73081564 | 0.81[AFR][1000 genomes] |
| rs73081567 | 0.81[AFR][1000 genomes] |
| rs73081569 | 0.81[AFR][1000 genomes] |
| rs73081571 | 0.81[AFR][1000 genomes] |
| rs73081574 | 0.81[AFR][1000 genomes] |
| rs73081580 | 0.81[AFR][1000 genomes] |
| rs73081589 | 0.81[AFR][1000 genomes] |
| rs73081590 | 0.81[AFR][1000 genomes] |
| rs73081593 | 0.81[AFR][1000 genomes] |
| rs73081595 | 0.81[AFR][1000 genomes] |
| rs73081599 | 0.81[AFR][1000 genomes] |
| rs7705479 | 0.81[AFR][1000 genomes] |
| rs7709077 | 1.00[AFR][1000 genomes] |
| rs7709197 | 1.00[AFR][1000 genomes] |
| rs7710332 | 1.00[AFR][1000 genomes] |
| rs7710721 | 1.00[AFR][1000 genomes] |
| rs7711043 | 1.00[AFR][1000 genomes] |
| rs7711241 | 1.00[AFR][1000 genomes] |
| rs7730181 | 0.81[AFR][1000 genomes] |
| rs7730189 | 0.81[AFR][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | esv3386611 | chr5:41494995-41498593 | Weak transcription Enhancers Flanking Active TSS | n/a | n/a | inside rSNPs | diseases |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:41494400-41504600 | Weak transcription | Ovary | ovary |
| 2 | chr5:41495800-41507000 | Weak transcription | Left Ventricle | heart |
| 3 | chr5:41497200-41498400 | Enhancers | Pancreatic Islets | Pancreatic Islet |
| 4 | chr5:41497800-41504000 | Enhancers | Fetal Heart | heart |
