Variant report

Variant	rs73081549
Chromosome Location	chr5:41512544-41512545
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:41511986..41516214-chr5:41517012..41519107,3	K562	blood:

Extended variants
information (count: 47 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:46)

rs_ID	r²[population]
rs57298536	1.00[AFR][1000 genomes]
rs57590605	1.00[AFR][1000 genomes]
rs59447468	1.00[AFR][1000 genomes]
rs59814375	1.00[AFR][1000 genomes]
rs60682637	1.00[AFR][1000 genomes]
rs60707515	1.00[AFR][1000 genomes]
rs6877857	1.00[AFR][1000 genomes]
rs6878319	0.92[AFR][1000 genomes]
rs6878470	0.92[AFR][1000 genomes]
rs6896481	0.92[AFR][1000 genomes]
rs6896632	0.92[AFR][1000 genomes]
rs73081512	0.81[AFR][1000 genomes]
rs73081518	0.81[AFR][1000 genomes]
rs73081519	0.81[AFR][1000 genomes]
rs73081521	0.81[AFR][1000 genomes]
rs73081522	0.81[AFR][1000 genomes]
rs73081525	0.81[AFR][1000 genomes]
rs73081527	0.81[AFR][1000 genomes]
rs73081530	0.81[AFR][1000 genomes]
rs73081536	0.81[AFR][1000 genomes]
rs73081539	0.96[AFR][1000 genomes]
rs73081544	1.00[AFR][1000 genomes]
rs73081547	0.93[AFR][1000 genomes]
rs73081560	1.00[AFR][1000 genomes]
rs73081564	1.00[AFR][1000 genomes]
rs73081567	1.00[AFR][1000 genomes]
rs73081569	1.00[AFR][1000 genomes]
rs73081571	1.00[AFR][1000 genomes]
rs73081574	1.00[AFR][1000 genomes]
rs73081580	1.00[AFR][1000 genomes]
rs73081589	1.00[AFR][1000 genomes]
rs73081590	1.00[AFR][1000 genomes]
rs73081593	1.00[AFR][1000 genomes]
rs73081595	1.00[AFR][1000 genomes]
rs73081599	1.00[AFR][1000 genomes]
rs73083608	0.92[AFR][1000 genomes]
rs73083611	0.92[AFR][1000 genomes]
rs7705479	1.00[AFR][1000 genomes]
rs7709077	0.81[AFR][1000 genomes]
rs7709197	0.81[AFR][1000 genomes]
rs7710332	0.81[AFR][1000 genomes]
rs7710721	0.81[AFR][1000 genomes]
rs7711043	0.81[AFR][1000 genomes]
rs7711241	0.81[AFR][1000 genomes]
rs7730181	1.00[AFR][1000 genomes]
rs7730189	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv969281	chr5:41509672-41514269	Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:41511600-41513000	Enhancers	Fetal Heart	heart
2	chr5:41511800-41513200	Enhancers	Pancreatic Islets	Pancreatic Islet
3	chr5:41511800-41513200	Weak transcription	Left Ventricle	heart
4	chr5:41511800-41521800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
5	chr5:41511800-41521800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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