Variant report

Variant	rs73094605
Chromosome Location	chr12:40866512-40866513
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 50 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:48)

rs_ID	r²[population]
rs10506153	1.00[ASN][1000 genomes]
rs11564128	1.00[ASN][1000 genomes]
rs11564175	1.00[ASN][1000 genomes]
rs11564177	1.00[ASN][1000 genomes]
rs11564203	1.00[ASN][1000 genomes]
rs11564204	1.00[ASN][1000 genomes]
rs11564205	1.00[ASN][1000 genomes]
rs11564267	1.00[ASN][1000 genomes]
rs11829088	1.00[ASN][1000 genomes]
rs11834950	1.00[ASN][1000 genomes]
rs17128233	0.94[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs17128385	1.00[ASN][1000 genomes]
rs17128536	1.00[ASN][1000 genomes]
rs17444096	1.00[ASN][1000 genomes]
rs17444542	1.00[ASN][1000 genomes]
rs17444612	1.00[ASN][1000 genomes]
rs17466430	1.00[ASN][1000 genomes]
rs17491061	1.00[ASN][1000 genomes]
rs17492082	1.00[ASN][1000 genomes]
rs17492138	1.00[ASN][1000 genomes]
rs17520251	1.00[ASN][1000 genomes]
rs17520278	1.00[ASN][1000 genomes]
rs2114567	1.00[ASN][1000 genomes]
rs2405018	1.00[ASN][1000 genomes]
rs55775102	1.00[ASN][1000 genomes]
rs56245194	1.00[ASN][1000 genomes]
rs56322620	1.00[ASN][1000 genomes]
rs57997594	1.00[ASN][1000 genomes]
rs60776971	1.00[ASN][1000 genomes]
rs61007767	1.00[ASN][1000 genomes]
rs73100409	1.00[ASN][1000 genomes]
rs73100414	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73110067	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73110075	0.88[AFR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73115378	1.00[ASN][1000 genomes]
rs73115394	1.00[ASN][1000 genomes]
rs73115401	1.00[ASN][1000 genomes]
rs73117512	1.00[ASN][1000 genomes]
rs73119913	1.00[ASN][1000 genomes]
rs73123118	1.00[ASN][1000 genomes]
rs73123119	1.00[ASN][1000 genomes]
rs73123140	1.00[ASN][1000 genomes]
rs7314530	1.00[ASN][1000 genomes]
rs73275761	1.00[ASN][1000 genomes]
rs73279554	1.00[ASN][1000 genomes]
rs73279557	1.00[ASN][1000 genomes]
rs7484715	1.00[ASN][1000 genomes]
rs9705735	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv899033	chr12:40758652-41122288	Bivalent/Poised TSS Enhancers Strong transcription Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
2	nsv518952	chr12:40857620-40867333	Enhancers Weak transcription	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:40864000-40867600	Weak transcription	Fetal Heart	heart
2	chr12:40866400-40869400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell

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