Variant report

Variant	rs73096333
Chromosome Location	chr4:18481575-18481576
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 27 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs1847898	0.86[AFR][1000 genomes]
rs2086051	0.84[AFR][1000 genomes]
rs56882349	0.86[AFR][1000 genomes]
rs61138016	0.86[AFR][1000 genomes]
rs73094357	0.88[AFR][1000 genomes]
rs73094359	0.94[AFR][1000 genomes]
rs73094371	0.84[AFR][1000 genomes]
rs73094392	0.84[AFR][1000 genomes]
rs73096311	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73096316	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73096321	0.84[AFR][1000 genomes]
rs73096330	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73096366	0.94[AFR][1000 genomes]
rs73096384	0.94[AFR][1000 genomes]
rs73096385	0.94[AFR][1000 genomes]
rs73096394	0.86[AFR][1000 genomes]
rs73096396	0.86[AFR][1000 genomes]
rs73096400	0.86[AFR][1000 genomes]
rs73098304	0.86[AFR][1000 genomes]
rs73098305	0.86[AFR][1000 genomes]
rs73098310	0.86[AFR][1000 genomes]
rs73098312	0.86[AFR][1000 genomes]
rs73098315	0.83[AFR][1000 genomes]
rs73098320	0.83[AFR][1000 genomes]
rs73098328	0.81[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1003931	chr4:18241575-18849898	Enhancers Bivalent Enhancer Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
2	nsv533087	chr4:18362040-19176896	Enhancers Bivalent Enhancer ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:18481000-18483400	Enhancers	Pancreatic Islets	Pancreatic Islet
2	chr4:18481200-18481800	Enhancers	iPS-20b Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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