Variant report

Variant	rs73103326
Chromosome Location	chr2:231500625-231500626
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs4072492	1.00[EUR][1000 genomes]
rs4072493	1.00[EUR][1000 genomes]
rs4072494	1.00[EUR][1000 genomes]
rs4072495	1.00[EUR][1000 genomes]
rs4994158	1.00[EUR][1000 genomes]
rs55813008	1.00[EUR][1000 genomes]
rs59447445	1.00[EUR][1000 genomes]
rs59448537	1.00[EUR][1000 genomes]
rs61479181	1.00[EUR][1000 genomes]
rs6436961	1.00[EUR][1000 genomes]
rs6436962	1.00[EUR][1000 genomes]
rs73103330	1.00[EUR][1000 genomes]
rs73103367	1.00[EUR][1000 genomes]
rs73106851	1.00[EUR][1000 genomes]
rs73108724	1.00[EUR][1000 genomes]
rs73992491	1.00[EUR][1000 genomes]
rs7572545	1.00[EUR][1000 genomes]
rs7586488	1.00[EUR][1000 genomes]
rs7604318	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv875955	chr2:231440555-231500805	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv527319	chr2:231492816-231501467	Enhancers Bivalent/Poised TSS Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:231500600-231500800	Enhancers	Primary T helper naive cells from peripheral blood	blood
2	chr2:231500600-231501400	Enhancers	GM12878-XiMat	blood
3	chr2:231500600-231502200	Enhancers	Primary B cells from peripheral blood	blood
4	chr2:231500600-231502200	Enhancers	Primary T helper memory cells from peripheral blood 1	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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