Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs1447370	0.81[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs16884077	1.00[EUR][1000 genomes]
rs16884127	1.00[EUR][1000 genomes]
rs16884144	1.00[EUR][1000 genomes]
rs16884156	1.00[EUR][1000 genomes]
rs73213194	0.87[EUR][1000 genomes]
rs73213196	0.87[EUR][1000 genomes]
rs73213199	1.00[EUR][1000 genomes]
rs73213201	1.00[EUR][1000 genomes]
rs73214905	0.90[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73214907	0.82[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73214910	0.87[EUR][1000 genomes]
rs73214913	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73214914	0.87[EUR][1000 genomes]
rs73214915	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73214924	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73214926	0.87[EUR][1000 genomes]
rs73214940	0.87[EUR][1000 genomes]
rs73214941	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73214946	0.87[EUR][1000 genomes]
rs73214956	0.87[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv878810	chr4:30823157-30987395	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
2	nsv998450	chr4:30823631-31628179	Weak transcription Enhancers Genic enhancers Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:30868800-30886800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
2	chr4:30870800-30903200	Weak transcription	Fetal Lung	lung
3	chr4:30877600-30884000	Weak transcription	Fetal Heart	heart
4	chr4:30878000-30885400	Weak transcription	Rectal Smooth Muscle	rectum
5	chr4:30879800-30893000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr4:30881800-30886400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
7	chr4:30882400-30882600	Enhancers	HUES48 Cell Line	embryonic stem cell
8	chr4:30882400-30883200	Enhancers	Aorta	Aorta

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