Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:142337305..142339939-chr3:142351079..142353328,2	K562	blood:

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs11711434	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1403726	0.84[EUR][1000 genomes]
rs17623058	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2140435	0.82[EUR][1000 genomes]
rs2140436	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs55655603	0.86[AFR][1000 genomes]
rs55951550	0.80[EUR][1000 genomes]
rs56161530	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs56246347	0.86[AFR][1000 genomes]
rs56328361	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs56397702	1.00[AFR][1000 genomes]
rs6440100	0.81[EUR][1000 genomes]
rs6773213	0.81[ASN][1000 genomes]
rs6797237	0.81[ASN][1000 genomes]
rs6797745	0.81[ASN][1000 genomes]
rs6800573	0.81[ASN][1000 genomes]
rs73228759	0.85[EUR][1000 genomes]
rs73228762	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs73228782	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs73230583	0.86[AFR][1000 genomes]
rs73230587	0.86[AFR][1000 genomes]
rs73230588	0.86[AFR][1000 genomes]
rs7622648	0.81[ASN][1000 genomes]
rs9683274	0.97[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv877560	chr3:142132749-142362179	Strong transcription ZNF genes & repeats Weak transcription Active TSS Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	35 gene(s)	inside rSNPs	diseases
2	nsv932989	chr3:142204208-142423305	Weak transcription Strong transcription Active TSS Flanking Active TSS Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:142334000-142357200	Weak transcription	Pancreas	Pancrea
2	chr3:142343400-142366400	Weak transcription	Fetal Intestine Small	intestine
3	chr3:142345200-142353800	Weak transcription	Rectal Mucosa Donor 29	rectum
4	chr3:142346200-142354800	Weak transcription	A549	lung
5	chr3:142346600-142351600	Weak transcription	Rectal Mucosa Donor 31	rectum
6	chr3:142348800-142364800	Weak transcription	Sigmoid Colon	Sigmoid Colon
7	chr3:142349800-142356600	Weak transcription	Fetal Brain Male	brain

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