Variant report

Variant	rs73242917
Chromosome Location	chr8:66710869-66710870
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:66704507..66706983-chr8:66710489..66713459,3	K562	blood:

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs11992833	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs16932340	0.83[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs57416148	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs57759707	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs58156571	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs59812763	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73240781	0.86[EUR][1000 genomes]
rs73240793	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73242914	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73242921	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73242933	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73242942	0.91[AFR][1000 genomes];0.86[EUR][1000 genomes]
rs73242949	0.82[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73242959	0.91[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73242967	1.00[EUR][1000 genomes]
rs7463008	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1793412	chr8:66705321-66761366	Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:51 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:66701600-66717000	Weak transcription	Gastric	stomach
2	chr8:66703200-66711800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr8:66703800-66711200	Weak transcription	Small Intestine	intestine
4	chr8:66703800-66711800	Weak transcription	Duodenum Smooth Muscle	Duodenum
5	chr8:66706200-66711800	Weak transcription	K562	blood
6	chr8:66707000-66711800	Weak transcription	H9 Cell Line	embryonic stem cell
7	chr8:66707200-66712200	Weak transcription	Colon Smooth Muscle	Colon
8	chr8:66707600-66712200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
9	chr8:66707600-66712400	Weak transcription	Right Atrium	heart
10	chr8:66707800-66711000	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
11	chr8:66707800-66711800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
12	chr8:66707800-66715000	Weak transcription	Pancreas	Pancrea
13	chr8:66707800-66715200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
14	chr8:66707800-66720200	Weak transcription	Aorta	Aorta
15	chr8:66708000-66711000	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
16	chr8:66708000-66711800	Weak transcription	Left Ventricle	heart
17	chr8:66708000-66711800	Weak transcription	Stomach Mucosa	stomach
18	chr8:66708000-66711800	Weak transcription	HMEC	breast
19	chr8:66708000-66712400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
20	chr8:66708000-66715000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
21	chr8:66708000-66715000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
22	chr8:66708000-66715000	Weak transcription	Thymus	Thymus
23	chr8:66708200-66711600	Weak transcription	HepG2	liver
24	chr8:66708600-66711400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
25	chr8:66708800-66712400	Weak transcription	Primary B cells from cord blood	blood
26	chr8:66709600-66711400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
27	chr8:66709800-66711000	Weak transcription	Primary T helper cells PMA-I stimulated	--
28	chr8:66709800-66711200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
29	chr8:66709800-66711200	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
30	chr8:66709800-66711600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
31	chr8:66709800-66711600	Weak transcription	HUES64 Cell Line	embryonic stem cell
32	chr8:66709800-66711600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
33	chr8:66709800-66711600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
34	chr8:66709800-66711800	Weak transcription	H1 Cell Line	embryonic stem cell
35	chr8:66710000-66711000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
36	chr8:66710000-66711000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
37	chr8:66710000-66711000	Weak transcription	GM12878-XiMat	blood
38	chr8:66710000-66711400	Weak transcription	HUES48 Cell Line	embryonic stem cell
39	chr8:66710000-66711800	Weak transcription	HUES6 Cell Line	embryonic stem cell
40	chr8:66710000-66712600	Weak transcription	Fetal Thymus	thymus
41	chr8:66710400-66712800	Enhancers	Primary T helper naive cells fromperipheralblood	blood
42	chr8:66710600-66712800	Enhancers	Primary T helper cells fromperipheralblood	blood
43	chr8:66710600-66713400	Enhancers	Primary T cells fromperipheralblood	blood
44	chr8:66710600-66713400	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
45	chr8:66710800-66711000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
46	chr8:66710800-66711800	ZNF genes & repeats	Dnd41	blood
47	chr8:66710800-66712200	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
48	chr8:66710800-66712400	Enhancers	Primary T cells from cord blood	blood
49	chr8:66710800-66712600	Enhancers	Primary T helper naive cells from peripheral blood	blood
50	chr8:66710800-66712800	Enhancers	Primary T helper memory cells from peripheral blood 1	blood

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