Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:66754650..66757052-chr8:66762979..66767192,3	MCF-7	breast:
2	chr8:66752149..66754541-chr8:66764690..66767016,4	K562	blood:

Variant related genes	Relation type
ENSG00000205268	Chromatin interaction
ENSG00000272192	Chromatin interaction

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs11992833	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11993474	0.87[AMR][1000 genomes]
rs11994363	0.87[AMR][1000 genomes]
rs11994410	0.87[AMR][1000 genomes]
rs16932340	0.83[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs57416148	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57759707	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57871763	0.87[AMR][1000 genomes]
rs58020170	0.87[AMR][1000 genomes]
rs58156571	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59812763	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73240781	0.86[EUR][1000 genomes]
rs73240793	0.83[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73242914	0.91[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73242917	0.91[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73242921	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73242933	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73242942	1.00[AFR][1000 genomes];0.86[EUR][1000 genomes]
rs73242949	0.91[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73242967	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73242968	0.87[AMR][1000 genomes]
rs73242971	0.87[AMR][1000 genomes]
rs73242973	0.87[AMR][1000 genomes]
rs73242975	0.87[AMR][1000 genomes]
rs73242981	0.87[AMR][1000 genomes]
rs73242982	0.87[AMR][1000 genomes]
rs73242984	0.87[AMR][1000 genomes]
rs73244804	0.87[AMR][1000 genomes]
rs7463008	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3446467	chr8:66749863-67667068	Enhancers Genic enhancers Active TSS Strong transcription Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	73 gene(s)	inside rSNPs	diseases
2	nsv611456	chr8:66759626-66772558	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:66761000-66767000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
2	chr8:66761000-66769600	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
3	chr8:66765800-66767200	Enhancers	Primary B cells from peripheral blood	blood
4	chr8:66766200-66767000	Flanking Active TSS	GM12878-XiMat	blood
5	chr8:66766400-66771000	Weak transcription	A549	lung

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