Variant report

Variant	rs73257247
Chromosome Location	chr8:62857587-62857588
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:62851592..62853559-chr8:62856440..62858366,2	K562	blood:
2	chr8:62850703..62853092-chr8:62855919..62858366,2	K562	blood:

Extended variants
information (count: 28 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs57225236	1.00[EUR][1000 genomes]
rs58123985	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58526571	1.00[EUR][1000 genomes]
rs58599260	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61636161	1.00[EUR][1000 genomes]
rs73259032	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73259033	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73261011	1.00[EUR][1000 genomes]
rs73261028	1.00[EUR][1000 genomes]
rs73261030	1.00[EUR][1000 genomes]
rs73261047	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73261084	1.00[EUR][1000 genomes]
rs73261089	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73261092	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73261097	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73263030	1.00[EUR][1000 genomes]
rs73263057	1.00[EUR][1000 genomes]
rs73263065	1.00[EUR][1000 genomes]
rs73263079	1.00[EUR][1000 genomes]
rs73265002	1.00[EUR][1000 genomes]
rs73682364	1.00[EUR][1000 genomes]
rs73685136	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1024432	chr8:62086247-62898782	Flanking Active TSS Enhancers Weak transcription Strong transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
2	nsv932198	chr8:62336705-62914562	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
3	esv2761430	chr8:62517980-62873803	Weak transcription Enhancers Genic enhancers Flanking Active TSS ZNF genes & repeats Strong transcription Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
4	nsv1015216	chr8:62517980-62873803	Enhancers Weak transcription Active TSS Flanking Active TSS Genic enhancers Strong transcription ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
5	nsv831338	chr8:62736394-62913048	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
6	nsv1032414	chr8:62789246-62861376	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:62854800-62859000	Weak transcription	iPS-18 Cell Line	embryonic stem cell

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