Variant report

Variant	rs73259032
Chromosome Location	chr8:62883049-62883050
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 24 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs57225236	1.00[EUR][1000 genomes]
rs58123985	1.00[EUR][1000 genomes]
rs58526571	1.00[EUR][1000 genomes]
rs58599260	0.96[AFR][1000 genomes]
rs61636161	1.00[EUR][1000 genomes]
rs73257247	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73259033	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73261011	1.00[EUR][1000 genomes]
rs73261028	1.00[EUR][1000 genomes]
rs73261030	1.00[EUR][1000 genomes]
rs73261047	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73261084	1.00[EUR][1000 genomes]
rs73261089	1.00[EUR][1000 genomes]
rs73261092	1.00[EUR][1000 genomes]
rs73261097	1.00[EUR][1000 genomes]
rs73263030	1.00[EUR][1000 genomes]
rs73263057	1.00[EUR][1000 genomes]
rs73263065	1.00[EUR][1000 genomes]
rs73263079	1.00[EUR][1000 genomes]
rs73265002	1.00[EUR][1000 genomes]
rs73685136	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1024432	chr8:62086247-62898782	Flanking Active TSS Enhancers Weak transcription Strong transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
2	nsv932198	chr8:62336705-62914562	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
3	nsv831338	chr8:62736394-62913048	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:62882400-62884200	Enhancers	Rectal Smooth Muscle	rectum
2	chr8:62883000-62884000	Enhancers	Skeletal Muscle Male	skeletal muscle
3	chr8:62883000-62885400	Enhancers	Colon Smooth Muscle	Colon

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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