Variant report
Variant | rs73259033 |
---|---|
Chromosome Location | chr8:62885644-62885645 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:2)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
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(count:2 , 50 per page) page:
1
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rs_ID | r2[population] |
---|---|
rs57225236 | 1.00[EUR][1000 genomes] |
rs58123985 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs58526571 | 1.00[EUR][1000 genomes] |
rs58599260 | 0.96[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs61636161 | 1.00[EUR][1000 genomes] |
rs73257247 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs73259032 | 1.00[AFR][1000 genomes];1.00[EUR][1000 genomes] |
rs73261011 | 1.00[EUR][1000 genomes] |
rs73261028 | 1.00[EUR][1000 genomes] |
rs73261030 | 1.00[EUR][1000 genomes] |
rs73261047 | 0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs73261084 | 1.00[EUR][1000 genomes] |
rs73261089 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs73261092 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs73261097 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs73263030 | 1.00[EUR][1000 genomes] |
rs73263057 | 1.00[EUR][1000 genomes] |
rs73263065 | 1.00[EUR][1000 genomes] |
rs73263079 | 1.00[EUR][1000 genomes] |
rs73265002 | 1.00[EUR][1000 genomes] |
rs73685136 | 1.00[EUR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv1024432 | chr8:62086247-62898782 | Flanking Active TSS Enhancers Weak transcription Strong transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 31 gene(s) | inside rSNPs | diseases |
2 | nsv932198 | chr8:62336705-62914562 | Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 25 gene(s) | inside rSNPs | diseases |
3 | nsv831338 | chr8:62736394-62913048 | Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 8 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr8:62885400-62886600 | Weak transcription | Stomach Smooth Muscle | stomach |