Variant report

Variant	rs73262970
Chromosome Location	chr8:69224536-69224537
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 26 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11994968	1.00[EUR][1000 genomes]
rs1400551	1.00[EUR][1000 genomes]
rs16934389	1.00[EUR][1000 genomes]
rs16934407	1.00[EUR][1000 genomes]
rs16934575	1.00[EUR][1000 genomes]
rs16934578	1.00[EUR][1000 genomes]
rs57801041	1.00[EUR][1000 genomes]
rs58125593	1.00[EUR][1000 genomes]
rs6981953	1.00[EUR][1000 genomes]
rs6982194	1.00[EUR][1000 genomes]
rs6998686	1.00[EUR][1000 genomes]
rs6999119	1.00[EUR][1000 genomes]
rs72664912	1.00[EUR][1000 genomes]
rs72664918	1.00[EUR][1000 genomes]
rs72664937	1.00[EUR][1000 genomes]
rs72664939	1.00[EUR][1000 genomes]
rs72664940	1.00[EUR][1000 genomes]
rs72664943	1.00[EUR][1000 genomes]
rs72664944	1.00[EUR][1000 genomes]
rs7827049	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1028889	chr8:69026806-69308725	Weak transcription Enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv948687	chr8:69041121-69642540	Flanking Bivalent TSS/Enh Enhancers Weak transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
3	nsv890977	chr8:69173049-69236718	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
4	nsv890978	chr8:69176154-69236718	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
5	nsv890979	chr8:69176154-69252417	Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Enhancers Bivalent/Poised TSS Weak transcription Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
6	nsv890980	chr8:69181681-69252417	Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Enhancers ZNF genes & repeats Bivalent/Poised TSS Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:69222000-69225000	Weak transcription	Pancreas	Pancrea
2	chr8:69224400-69225200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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