Variant report

Variant	rs73269170
Chromosome Location	chr8:95830056-95830057
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:95823624..95825340-chr8:95828909..95830568,2	K562	blood:

Extended variants
information (count: 62 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:59)

rs_ID	r²[population]
rs10956927	0.82[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11774806	0.93[ASN][1000 genomes]
rs11775899	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11776131	0.97[ASN][1000 genomes]
rs11776489	0.82[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11776687	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11776830	0.88[EUR][1000 genomes]
rs11777353	0.82[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11778250	0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11779041	0.80[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11779252	0.88[ASN][1000 genomes]
rs11781099	0.93[ASN][1000 genomes]
rs11781188	0.90[ASN][1000 genomes]
rs11781429	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11781843	0.97[ASN][1000 genomes]
rs11782617	0.81[EUR][1000 genomes]
rs11783589	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11783941	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11784299	0.82[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11786021	0.93[ASN][1000 genomes]
rs11786088	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11786389	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11786429	0.97[ASN][1000 genomes]
rs11786451	0.80[EUR][1000 genomes]
rs11787377	0.81[AFR][1000 genomes];0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11787442	0.93[ASN][1000 genomes]
rs12056517	0.81[EUR][1000 genomes]
rs12056808	0.81[EUR][1000 genomes]
rs16917079	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs16917081	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs16917082	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs16917093	0.82[EUR][1000 genomes]
rs16917102	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs16917106	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs17359493	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4073916	0.97[ASN][1000 genomes]
rs4075834	0.82[AFR][1000 genomes];0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4345531	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4355737	0.83[AFR][1000 genomes];0.82[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs57063661	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs57773845	0.93[ASN][1000 genomes]
rs58489999	0.90[ASN][1000 genomes]
rs58675831	0.82[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs59091366	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs59265059	0.81[AFR][1000 genomes];0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs59521030	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs60171840	0.81[AFR][1000 genomes];0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6986418	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6989591	0.82[EUR][1000 genomes]
rs7009940	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs716733	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs73269162	0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73269188	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs73269191	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs73269198	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs73269199	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs73271148	0.80[EUR][1000 genomes]
rs7834966	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7844932	0.92[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1017301	chr8:95273503-96248352	Weak transcription Enhancers Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	87 gene(s)	inside rSNPs	diseases
2	nsv539680	chr8:95273503-96248352	Enhancers Weak transcription Strong transcription Flanking Active TSS Genic enhancers Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	87 gene(s)	inside rSNPs	diseases
3	nsv532338	chr8:95296118-95971825	Enhancers Strong transcription Weak transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	61 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:95827400-95831400	Weak transcription	A549	lung
2	chr8:95827600-95834000	Weak transcription	HepG2	liver
3	chr8:95829200-95834800	Weak transcription	Right Atrium	heart

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