Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr20:23052466..23054155-chr20:23054517..23057205,2	K562	blood:
2	chr20:23052466..23054957-chr20:23062982..23064859,2	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CD93-4	chr20:23053705-23055175	NONHSAT079033
2	lnc-CD93-4	chr20:23053705-23055175	refGeneNc_4391_NR_034149

rSNPs within LD-proxies of this variant (count:21)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv912816	chr20:22757960-23062927	Flanking Active TSS Bivalent/Poised TSS Enhancers Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
2	esv2758516	chr20:23029404-23173240	Enhancers Weak transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
3	esv2758789	chr20:23029404-23179604	Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr20:23043400-23063000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr20:23043600-23062200	Weak transcription	Placenta	Placenta
3	chr20:23043600-23066600	Weak transcription	Aorta	Aorta
4	chr20:23043800-23055200	Weak transcription	Skeletal Muscle Male	skeletal muscle
5	chr20:23047200-23057800	Strong transcription	Primary neutrophils fromperipheralblood	blood
6	chr20:23047800-23059000	Weak transcription	Right Atrium	heart
7	chr20:23050800-23061200	Weak transcription	Esophagus	oesophagus
8	chr20:23051200-23055000	Weak transcription	Primary T cells from cord blood	blood
9	chr20:23051800-23058400	Strong transcription	Monocytes-CD14+_RO01746	blood
10	chr20:23052600-23054200	Enhancers	Fetal Stomach	stomach
11	chr20:23052600-23055400	Enhancers	HUVEC	blood vessel
12	chr20:23053000-23057000	Strong transcription	Primary monocytes fromperipheralblood	blood
13	chr20:23053200-23054600	Weak transcription	Ovary	ovary
14	chr20:23053400-23061200	Weak transcription	Primary hematopoietic stem cells	blood
15	chr20:23054000-23054200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
16	chr20:23054000-23054200	Bivalent Enhancer	IMR90 fetal lung fibroblasts Cell Line	lung
17	chr20:23054000-23054200	Bivalent Enhancer	Fetal Brain Male	brain
18	chr20:23054000-23054200	Enhancers	Left Ventricle	heart
19	chr20:23054000-23054200	Enhancers	Lung	lung
20	chr20:23054000-23063400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood

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