Variant report

Variant	rs73316341
Chromosome Location	chr14:78622339-78622340
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs17107006	1.00[AMR][1000 genomes]
rs17107009	1.00[AMR][1000 genomes]
rs28542174	1.00[AMR][1000 genomes]
rs28731105	1.00[AMR][1000 genomes]
rs59184512	1.00[AMR][1000 genomes]
rs73308584	1.00[AMR][1000 genomes]
rs73308593	1.00[AMR][1000 genomes]
rs73310308	1.00[AMR][1000 genomes]
rs73316330	1.00[AMR][1000 genomes]
rs73316332	1.00[AMR][1000 genomes]
rs73316335	1.00[AMR][1000 genomes]
rs73316342	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73316345	1.00[AMR][1000 genomes]
rs73316348	1.00[AMR][1000 genomes]
rs73316357	1.00[AMR][1000 genomes]
rs73316362	1.00[AMR][1000 genomes]
rs73316371	1.00[AMR][1000 genomes]
rs73316373	1.00[AMR][1000 genomes]
rs73316375	1.00[AMR][1000 genomes]
rs73316376	1.00[AMR][1000 genomes]
rs73322213	1.00[AMR][1000 genomes]
rs73322215	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv902109	chr14:78603877-78634174	Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:78619200-78623800	Weak transcription	Brain Hippocampus Middle	brain
2	chr14:78619400-78622400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
3	chr14:78619800-78623400	Weak transcription	Brain Germinal Matrix	brain
4	chr14:78622200-78622800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
5	chr14:78622200-78623000	Enhancers	NHEK	skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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