The 2.0 version of rSNPBase

Variant report

Variant rs73319288
Chromosome Location chr10:97150803-97150804
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:97107200-97151800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr10:97130200-97156600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr10:97135600-97155600 Weak transcription iPS-15b Cell Line embryonic stem cell
4 chr10:97137800-97156000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr10:97140600-97158600 Weak transcription HSMM muscle
6 chr10:97140800-97152400 Weak transcription Colonic Mucosa Colon
7 chr10:97142200-97151800 Weak transcription H1 Cell Line embryonic stem cell
8 chr10:97142200-97152400 Weak transcription Fetal Muscle Trunk muscle
9 chr10:97142400-97152400 Weak transcription H9 Cell Line embryonic stem cell
10 chr10:97142600-97155600 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr10:97143000-97151400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
12 chr10:97143600-97151000 Weak transcription Fetal Lung lung
13 chr10:97143600-97151400 Weak transcription iPS-20b Cell Line embryonic stem cell
14 chr10:97144000-97151600 Weak transcription iPS-18 Cell Line embryonic stem cell
15 chr10:97144000-97152400 Weak transcription HUES6 Cell Line embryonic stem cell
16 chr10:97144000-97152400 Weak transcription Psoas Muscle Psoas
17 chr10:97144000-97155400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
18 chr10:97144200-97151600 Weak transcription HUES48 Cell Line embryonic stem cell
19 chr10:97144400-97152400 Weak transcription Ovary ovary
20 chr10:97144400-97154000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr10:97144400-97155600 Weak transcription HUES64 Cell Line embryonic stem cell
22 chr10:97145000-97151200 Weak transcription Fetal Brain Female brain
23 chr10:97145000-97153200 Weak transcription Fetal Muscle Leg muscle
24 chr10:97146400-97152400 Enhancers GM12878-XiMat blood
25 chr10:97146800-97168400 Weak transcription Small Intestine intestine
26 chr10:97147000-97152600 Enhancers Cortex derived primary cultured neurospheres brain
27 chr10:97147200-97152000 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
28 chr10:97147200-97152400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
29 chr10:97147200-97153800 Weak transcription Primary hematopoietic stem cells short term culture blood
30 chr10:97147200-97158800 Genic enhancers Skeletal Muscle Male skeletal muscle
31 chr10:97147400-97152600 Enhancers Brain Anterior Caudate brain
32 chr10:97147400-97154000 Genic enhancers Stomach Smooth Muscle stomach
33 chr10:97147400-97154400 Genic enhancers Left Ventricle heart
34 chr10:97147600-97153400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr10:97148000-97151600 Enhancers Brain Cingulate Gyrus brain
36 chr10:97148400-97154400 Weak transcription Pancreatic Islets Pancreatic Islet
37 chr10:97148600-97152600 Weak transcription Fetal Intestine Large intestine
38 chr10:97148600-97153400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr10:97148600-97156600 Weak transcription Esophagus oesophagus
40 chr10:97149000-97153000 Strong transcription Placenta Placenta
41 chr10:97149200-97151400 Genic enhancers Skeletal Muscle Female skeletal muscle
42 chr10:97149200-97155600 Weak transcription Brain Germinal Matrix brain
43 chr10:97149200-97155800 Weak transcription Rectal Mucosa Donor 31 rectum
44 chr10:97149600-97152200 Enhancers Adipose Nuclei Adipose
45 chr10:97149600-97156600 Weak transcription Duodenum Mucosa Duodenum
46 chr10:97149800-97154600 Genic enhancers Colon Smooth Muscle Colon
47 chr10:97149800-97156600 Weak transcription Sigmoid Colon Sigmoid Colon
48 chr10:97150000-97151000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
49 chr10:97150000-97152400 Weak transcription Gastric stomach
50 chr10:97150000-97152400 Weak transcription Lung lung

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Last update: Aug 31, 2015