The 2.0 version of rSNPBase

Variant report

Variant rs73321241
Chromosome Location chr10:97190957-97190958
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:97158600-97199600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr10:97169600-97204800 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr10:97170600-97197800 Weak transcription H9 Cell Line embryonic stem cell
4 chr10:97171000-97208000 Weak transcription HUES64 Cell Line embryonic stem cell
5 chr10:97175800-97204000 Weak transcription Psoas Muscle Psoas
6 chr10:97176000-97196800 Weak transcription iPS-18 Cell Line embryonic stem cell
7 chr10:97176000-97199200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
8 chr10:97178800-97198800 Genic enhancers Colon Smooth Muscle Colon
9 chr10:97180800-97195400 Weak transcription Ovary ovary
10 chr10:97181200-97193600 Genic enhancers Breast Myoepithelial Primary Cells Breast
11 chr10:97181800-97193000 Genic enhancers Stomach Smooth Muscle stomach
12 chr10:97182200-97196800 Weak transcription HUES48 Cell Line embryonic stem cell
13 chr10:97183200-97194200 Weak transcription HSMM muscle
14 chr10:97185800-97191600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
15 chr10:97185800-97205000 Weak transcription ES-I3 Cell Line embryonic stem cell
16 chr10:97186600-97192800 Weak transcription Fetal Kidney kidney
17 chr10:97186600-97196200 Genic enhancers Skeletal Muscle Female skeletal muscle
18 chr10:97186800-97193000 Weak transcription Fetal Lung lung
19 chr10:97187000-97191600 Genic enhancers Skeletal Muscle Male skeletal muscle
20 chr10:97187200-97194000 Enhancers Adipose Nuclei Adipose
21 chr10:97187200-97205400 Weak transcription K562 blood
22 chr10:97187400-97193000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr10:97187600-97191800 Strong transcription Aorta Aorta
24 chr10:97187800-97193000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr10:97187800-97194400 Weak transcription HUES6 Cell Line embryonic stem cell
26 chr10:97188400-97193200 Enhancers Fetal Heart heart
27 chr10:97188600-97194200 Genic enhancers Liver Liver
28 chr10:97188800-97191000 Weak transcription Fetal Brain Female brain
29 chr10:97188800-97191200 Weak transcription Gastric stomach
30 chr10:97188800-97191800 Weak transcription Brain Substantia Nigra brain
31 chr10:97188800-97195000 Weak transcription iPS-15b Cell Line embryonic stem cell
32 chr10:97189000-97192000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr10:97189200-97205000 Weak transcription Esophagus oesophagus
34 chr10:97189600-97196000 Weak transcription HSMMtube muscle
35 chr10:97189800-97192600 Enhancers GM12878-XiMat blood
36 chr10:97190000-97191000 Enhancers Brain Inferior Temporal Lobe brain
37 chr10:97190000-97191000 Enhancers Duodenum Smooth Muscle Duodenum
38 chr10:97190000-97191000 Enhancers Fetal Thymus thymus
39 chr10:97190000-97192000 Genic enhancers HepG2 liver
40 chr10:97190000-97192600 Enhancers Right Atrium heart
41 chr10:97190200-97191600 Strong transcription Placenta Placenta
42 chr10:97190200-97191800 Genic enhancers Brain Dorsolateral Prefrontal Cortex brain
43 chr10:97190200-97207200 Weak transcription Colonic Mucosa Colon
44 chr10:97190400-97191000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
45 chr10:97190400-97191000 Enhancers Stomach Mucosa stomach
46 chr10:97190400-97191200 Enhancers Brain Cingulate Gyrus brain
47 chr10:97190400-97191200 Weak transcription Brain Germinal Matrix brain
48 chr10:97190400-97191600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr10:97190400-97191600 Weak transcription HMEC breast
50 chr10:97190400-97192400 Genic enhancers Brain Anterior Caudate brain

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Last update: Aug 31, 2015