The 2.0 version of rSNPBase

Variant report

Variant rs6583999
Chromosome Location chr10:97170959-97170960
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:97154400-97190800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr10:97156800-97173400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr10:97156800-97182600 Weak transcription Esophagus oesophagus
4 chr10:97157000-97173200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr10:97157000-97174000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr10:97157000-97183200 Weak transcription Colonic Mucosa Colon
7 chr10:97157000-97190400 Weak transcription Spleen Spleen
8 chr10:97158600-97199600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr10:97159200-97187000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr10:97162800-97171000 Strong transcription Placenta Placenta
11 chr10:97162800-97171200 Strong transcription Fetal Intestine Large intestine
12 chr10:97165400-97177200 Strong transcription HepG2 liver
13 chr10:97166400-97185800 Weak transcription Fetal Lung lung
14 chr10:97166600-97171800 Weak transcription Pancreatic Islets Pancreatic Islet
15 chr10:97167000-97173600 Weak transcription Gastric stomach
16 chr10:97167000-97173800 Weak transcription Brain Germinal Matrix brain
17 chr10:97167200-97173800 Weak transcription Pancreas Pancrea
18 chr10:97167200-97183200 Weak transcription Duodenum Mucosa Duodenum
19 chr10:97167400-97171000 Enhancers Cortex derived primary cultured neurospheres brain
20 chr10:97167600-97172000 Genic enhancers Skeletal Muscle Female skeletal muscle
21 chr10:97167800-97171000 Enhancers iPS-15b Cell Line embryonic stem cell
22 chr10:97167800-97173400 Weak transcription Fetal Muscle Trunk muscle
23 chr10:97168000-97173400 Weak transcription Fetal Intestine Small intestine
24 chr10:97168200-97171000 Enhancers Brain Hippocampus Middle brain
25 chr10:97168200-97172600 Weak transcription Psoas Muscle Psoas
26 chr10:97168200-97173800 Weak transcription Rectal Mucosa Donor 29 rectum
27 chr10:97168200-97174000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
28 chr10:97168200-97174000 Weak transcription Lung lung
29 chr10:97168400-97171000 Enhancers H1 Cell Line embryonic stem cell
30 chr10:97168600-97175200 Weak transcription HSMMtube muscle
31 chr10:97168800-97171400 Weak transcription Right Ventricle heart
32 chr10:97169000-97177000 Strong transcription Liver Liver
33 chr10:97169200-97172000 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr10:97169200-97172400 Weak transcription Fetal Muscle Leg muscle
35 chr10:97169200-97180400 Weak transcription Ovary ovary
36 chr10:97169400-97171600 Genic enhancers Rectal Smooth Muscle rectum
37 chr10:97169400-97174400 Genic enhancers Breast Myoepithelial Primary Cells Breast
38 chr10:97169600-97171000 Weak transcription Fetal Brain Female brain
39 chr10:97169600-97172000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr10:97169600-97174400 Weak transcription ES-WA7 Cell Line embryonic stem cell
41 chr10:97169600-97204800 Weak transcription Rectal Mucosa Donor 31 rectum
42 chr10:97169800-97171000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
43 chr10:97169800-97171000 Enhancers HUES48 Cell Line embryonic stem cell
44 chr10:97169800-97171000 Enhancers HUES64 Cell Line embryonic stem cell
45 chr10:97169800-97171000 Enhancers iPS-20b Cell Line embryonic stem cell
46 chr10:97169800-97171000 Genic enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr10:97169800-97171000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
48 chr10:97169800-97171400 Weak transcription Fetal Brain Male brain
49 chr10:97169800-97172000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
50 chr10:97169800-97172400 Strong transcription Colon Smooth Muscle Colon

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015