Variant report

No data

(count:8 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr11:64769264..64770783-chr11:64949717..64951768,2	K562	blood:
2	chr11:64655617..64657226-chr11:64769423..64771282,2	MCF-7	breast:
3	chr11:64769201..64771374-chr11:64779772..64781623,2	MCF-7	breast:
4	chr11:64769114..64776603-chr11:64778484..64784252,8	K562	blood:
5	chr11:64764651..64767440-chr11:64768084..64771691,3	MCF-7	breast:
6	chr11:64764913..64771112-chr11:64779041..64784424,8	K562	blood:
7	chr11:64644673..64646789-chr11:64768413..64771411,2	K562	blood:
8	chr11:64767765..64771018-chr11:64774055..64777389,4	K562	blood:

No data

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10897540	0.89[CHD][hapmap];0.84[LWK][hapmap];1.00[YRI][hapmap];0.82[AFR][1000 genomes]
rs10897541	0.87[ASN][1000 genomes]
rs35733402	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3741392	0.84[YRI][hapmap]
rs7105002	0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7115455	0.83[AFR][1000 genomes]
rs733945	0.87[AFR][1000 genomes]
rs7933779	0.89[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs7947883	0.87[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv526181	chr11:64638041-65257329	Flanking Active TSS Enhancers Strong transcription Active TSS Weak transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	1539 gene(s)	inside rSNPs	diseases
2	nsv555208	chr11:64645119-64771179	Weak transcription Active TSS Genic enhancers Flanking Active TSS Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	1029 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:64764800-64774000	Weak transcription	NHDF-Ad	bronchial
2	chr11:64764800-64774000	Weak transcription	NHLF	lung
3	chr11:64764800-64781200	Weak transcription	Right Atrium	heart
4	chr11:64765000-64770400	Weak transcription	Fetal Stomach	stomach
5	chr11:64765000-64774000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr11:64765000-64780600	Weak transcription	H9 Cell Line	embryonic stem cell
7	chr11:64766800-64770200	Weak transcription	Placenta	Placenta
8	chr11:64767400-64774000	Weak transcription	A549	lung
9	chr11:64767400-64780400	Weak transcription	Pancreas	Pancrea
10	chr11:64768800-64769800	Enhancers	K562	blood
11	chr11:64769000-64770800	Enhancers	HepG2	liver
12	chr11:64769200-64769800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
13	chr11:64769200-64769800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
14	chr11:64769200-64770000	Enhancers	Right Ventricle	heart
15	chr11:64769200-64770200	Enhancers	Spleen	Spleen
16	chr11:64769200-64771200	Enhancers	Fetal Muscle Leg	muscle
17	chr11:64769200-64771400	Enhancers	Fetal Muscle Trunk	muscle
18	chr11:64769600-64769800	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
19	chr11:64769600-64770000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
20	chr11:64769600-64770000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
21	chr11:64769600-64770000	Enhancers	Left Ventricle	heart

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