Variant report

Variant	rs73334006
Chromosome Location	chr14:81542543-81542544
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 26 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs58040173	1.00[AMR][1000 genomes]
rs58133007	1.00[AMR][1000 genomes]
rs58679489	1.00[AMR][1000 genomes]
rs60977678	1.00[AMR][1000 genomes]
rs73338226	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73338235	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73338237	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73338251	1.00[AMR][1000 genomes]
rs73342195	1.00[AMR][1000 genomes]
rs73342245	1.00[AMR][1000 genomes]
rs73342273	1.00[AMR][1000 genomes]
rs73344031	1.00[AMR][1000 genomes]
rs73344062	1.00[AMR][1000 genomes]
rs73344072	1.00[AMR][1000 genomes]
rs73344073	1.00[AMR][1000 genomes]
rs73344075	1.00[AMR][1000 genomes]
rs73344078	1.00[AMR][1000 genomes]
rs73344096	1.00[AMR][1000 genomes]
rs73346054	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73347926	1.00[AMR][1000 genomes]
rs73347935	1.00[AMR][1000 genomes]
rs73347938	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73347947	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73347973	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1052999	chr14:81468860-81599074	Weak transcription Strong transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases
2	nsv542144	chr14:81468860-81599074	Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:81522600-81545600	Weak transcription	Thymus	Thymus
2	chr14:81537000-81554200	Weak transcription	Fetal Thymus	thymus
3	chr14:81538200-81593000	Weak transcription	Psoas Muscle	Psoas
4	chr14:81541000-81543400	Strong transcription	Dnd41	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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