Variant report

Variant	rs73347973
Chromosome Location	chr14:81470569-81470570
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:81467255..81470490-chr14:81470537..81472087,4	K562	blood:

Variant related genes	Relation type
ENSG00000271705	Chromatin interaction
ENSG00000271656	Chromatin interaction

Extended variants
information (count: 43 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:39)

rs_ID	r²[population]
rs11844944	1.00[EUR][1000 genomes]
rs11851120	1.00[EUR][1000 genomes]
rs13379243	1.00[EUR][1000 genomes]
rs2268467	0.82[AFR][1000 genomes]
rs28750114	1.00[EUR][1000 genomes]
rs58040173	1.00[AMR][1000 genomes]
rs58133007	1.00[AMR][1000 genomes]
rs58679489	1.00[AMR][1000 genomes]
rs60977678	1.00[AMR][1000 genomes]
rs73334006	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73338189	1.00[AMR][1000 genomes]
rs73338199	1.00[AMR][1000 genomes]
rs73338226	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73338235	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73338237	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73338251	1.00[AMR][1000 genomes]
rs73340105	1.00[AMR][1000 genomes]
rs73340175	1.00[AMR][1000 genomes]
rs73342195	1.00[AMR][1000 genomes]
rs73342245	1.00[AMR][1000 genomes]
rs73342273	1.00[AMR][1000 genomes]
rs73344031	1.00[AMR][1000 genomes]
rs73344062	1.00[AMR][1000 genomes]
rs73344072	1.00[AMR][1000 genomes]
rs73344073	1.00[AMR][1000 genomes]
rs73344075	1.00[AMR][1000 genomes]
rs73344078	1.00[AMR][1000 genomes]
rs73344096	1.00[AMR][1000 genomes]
rs73346054	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73347926	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73347933	1.00[EUR][1000 genomes]
rs73347935	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73347938	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73347947	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73349940	1.00[EUR][1000 genomes]
rs8007755	1.00[EUR][1000 genomes]
rs8008523	1.00[EUR][1000 genomes]
rs8012937	1.00[EUR][1000 genomes]
rs8013119	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869348	chr14:80921098-81535754	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
2	nsv983844	chr14:81467606-81470682	Enhancers Weak transcription Bivalent/Poised TSS Strong transcription Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a
3	nsv1052999	chr14:81468860-81599074	Weak transcription Strong transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases
4	nsv542144	chr14:81468860-81599074	Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:81455800-81492200	Weak transcription	Fetal Thymus	thymus
2	chr14:81468000-81486600	Weak transcription	Thymus	Thymus
3	chr14:81468400-81472600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr14:81469400-81470800	Weak transcription	K562	blood
5	chr14:81470400-81477200	Weak transcription	Dnd41	blood

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