Variant report

Variant	rs73347938
Chromosome Location	chr14:81466196-81466197
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:81464422..81467304-chr14:81478351..81480140,2	MCF-7	breast:

Extended variants
information (count: 39 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:38)

rs_ID	r²[population]
rs11844944	1.00[EUR][1000 genomes]
rs11851120	1.00[EUR][1000 genomes]
rs13379243	1.00[EUR][1000 genomes]
rs28750114	1.00[EUR][1000 genomes]
rs58040173	1.00[AMR][1000 genomes]
rs58133007	1.00[AMR][1000 genomes]
rs58679489	1.00[AMR][1000 genomes]
rs60977678	1.00[AMR][1000 genomes]
rs73334006	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73338189	1.00[AMR][1000 genomes]
rs73338199	1.00[AMR][1000 genomes]
rs73338226	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73338235	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73338237	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73338251	1.00[AMR][1000 genomes]
rs73340105	1.00[AMR][1000 genomes]
rs73340175	1.00[AMR][1000 genomes]
rs73342195	1.00[AMR][1000 genomes]
rs73342245	1.00[AMR][1000 genomes]
rs73342273	1.00[AMR][1000 genomes]
rs73344031	1.00[AMR][1000 genomes]
rs73344062	1.00[AMR][1000 genomes]
rs73344072	1.00[AMR][1000 genomes]
rs73344073	1.00[AMR][1000 genomes]
rs73344075	1.00[AMR][1000 genomes]
rs73344078	1.00[AMR][1000 genomes]
rs73344096	1.00[AMR][1000 genomes]
rs73346054	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73347926	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73347933	1.00[EUR][1000 genomes]
rs73347935	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73347947	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73347973	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73349940	1.00[EUR][1000 genomes]
rs8007755	1.00[EUR][1000 genomes]
rs8008523	1.00[EUR][1000 genomes]
rs8012937	1.00[EUR][1000 genomes]
rs8013119	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869348	chr14:80921098-81535754	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:81455800-81492200	Weak transcription	Fetal Thymus	thymus
2	chr14:81463000-81467200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr14:81463200-81469000	Weak transcription	K562	blood
4	chr14:81464400-81466800	Weak transcription	Thymus	Thymus
5	chr14:81465600-81467000	Weak transcription	Dnd41	blood
6	chr14:81465800-81466200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

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