Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:81472830..81475161-chr14:81475745..81477749,2	MCF-7	breast:
2	chr14:81468835..81472649-chr14:81474348..81477215,3	K562	blood:

Variant related genes	Relation type
ENSG00000271656	Chromatin interaction

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10131915	0.83[AMR][1000 genomes]
rs10483973	0.88[AMR][1000 genomes]
rs11844944	1.00[EUR][1000 genomes]
rs11847353	0.83[AFR][1000 genomes];0.88[AMR][1000 genomes]
rs11847606	0.88[AMR][1000 genomes]
rs11851120	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11851225	0.87[AFR][1000 genomes];0.94[AMR][1000 genomes]
rs13379243	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13379251	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28410258	0.83[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs28410717	0.83[AFR][1000 genomes];0.94[AMR][1000 genomes]
rs34331892	0.88[AMR][1000 genomes]
rs6574619	0.88[AMR][1000 genomes]
rs6574620	0.88[AMR][1000 genomes]
rs7152004	0.88[AMR][1000 genomes]
rs7152497	0.88[AMR][1000 genomes]
rs7154960	0.94[AMR][1000 genomes]
rs73347926	1.00[EUR][1000 genomes]
rs73347933	1.00[EUR][1000 genomes]
rs73347935	1.00[EUR][1000 genomes]
rs73347938	1.00[EUR][1000 genomes]
rs73347947	1.00[EUR][1000 genomes]
rs73347973	1.00[EUR][1000 genomes]
rs73349940	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73349970	0.94[AMR][1000 genomes]
rs8007755	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs8008523	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs8012937	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs8013119	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs8023193	0.88[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869348	chr14:80921098-81535754	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
2	nsv1052999	chr14:81468860-81599074	Weak transcription Strong transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases
3	nsv542144	chr14:81468860-81599074	Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:81455800-81492200	Weak transcription	Fetal Thymus	thymus
2	chr14:81468000-81486600	Weak transcription	Thymus	Thymus
3	chr14:81470400-81477200	Weak transcription	Dnd41	blood
4	chr14:81474800-81475200	Weak transcription	K562	blood

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