Variant report

Variant	rs73336837
Chromosome Location	chr8:126309873-126309874
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:126303707..126305559-chr8:126307667..126310106,2	K562	blood:
2	chr8:126306802..126309917-chr8:126312229..126314853,3	MCF-7	breast:
3	chr8:126309031..126311192-chr8:126314077..126316163,2	K562	blood:
4	chr8:126305198..126307115-chr8:126309185..126311282,2	MCF-7	breast:

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs16900491	0.90[EUR][1000 genomes]
rs16900500	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs58527250	0.98[EUR][1000 genomes]
rs59099103	0.98[EUR][1000 genomes]
rs6470348	0.93[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6985382	1.00[EUR][1000 genomes]
rs6997329	0.92[EUR][1000 genomes]
rs7002315	0.93[EUR][1000 genomes]
rs73351278	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7831918	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7841990	0.98[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891434	chr8:125630655-126324432	Strong transcription Enhancers Weak transcription Active TSS Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	80 gene(s)	inside rSNPs	diseases
2	nsv949614	chr8:126063646-126376699	Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
3	esv3419040	chr8:126271495-126339914	Enhancers Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	nsv891436	chr8:126283766-126345076	Active TSS Enhancers Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Genic enhancers	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:43 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:126264800-126310600	Weak transcription	Aorta	Aorta
2	chr8:126291000-126321600	Weak transcription	Primary B cells from cord blood	blood
3	chr8:126291200-126321000	Weak transcription	Primary B cells from peripheral blood	blood
4	chr8:126298400-126312800	Weak transcription	Gastric	stomach
5	chr8:126301800-126312400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr8:126301800-126312600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
7	chr8:126301800-126314600	Weak transcription	Sigmoid Colon	Sigmoid Colon
8	chr8:126301800-126319600	Weak transcription	Fetal Muscle Leg	muscle
9	chr8:126302000-126310600	Weak transcription	NH-A	brain
10	chr8:126302200-126318800	Weak transcription	Primary T cells from cord blood	blood
11	chr8:126302200-126318800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
12	chr8:126302600-126331000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
13	chr8:126303000-126310600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
14	chr8:126303000-126312800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
15	chr8:126303000-126314600	Weak transcription	Right Atrium	heart
16	chr8:126303200-126314400	Weak transcription	Fetal Intestine Small	intestine
17	chr8:126305600-126312600	Weak transcription	Fetal Thymus	thymus
18	chr8:126307200-126314600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
19	chr8:126307600-126312800	Weak transcription	HepG2	liver
20	chr8:126307800-126310000	Enhancers	Primary neutrophils fromperipheralblood	blood
21	chr8:126307800-126311600	Enhancers	GM12878-XiMat	blood
22	chr8:126308000-126310400	Weak transcription	Right Ventricle	heart
23	chr8:126308000-126312800	Weak transcription	Skeletal Muscle Female	skeletal muscle
24	chr8:126308000-126314600	Weak transcription	Left Ventricle	heart
25	chr8:126308000-126314600	Weak transcription	Skeletal Muscle Male	skeletal muscle
26	chr8:126308000-126336000	Weak transcription	Psoas Muscle	Psoas
27	chr8:126308600-126314600	Weak transcription	Fetal Kidney	kidney
28	chr8:126309000-126310000	Enhancers	HUES6 Cell Line	embryonic stem cell
29	chr8:126309000-126311200	Enhancers	HUES64 Cell Line	embryonic stem cell
30	chr8:126309200-126310000	Enhancers	iPS-15b Cell Line	embryonic stem cell
31	chr8:126309200-126310600	Weak transcription	Muscle Satellite Cultured Cells	--
32	chr8:126309200-126312800	Weak transcription	Osteobl	bone
33	chr8:126309200-126314800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
34	chr8:126309200-126319200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
35	chr8:126309400-126310000	Enhancers	HUES48 Cell Line	embryonic stem cell
36	chr8:126309600-126310600	Weak transcription	A549	lung
37	chr8:126309600-126310600	Weak transcription	HUVEC	blood vessel
38	chr8:126309600-126310800	Enhancers	H1 Cell Line	embryonic stem cell
39	chr8:126309800-126310000	Enhancers	Placenta Amnion	Placenta Amnion
40	chr8:126309800-126311000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
41	chr8:126309800-126314400	Weak transcription	Fetal Heart	heart
42	chr8:126309800-126315000	Weak transcription	H9 Cell Line	embryonic stem cell
43	chr8:126309800-126315000	Weak transcription	iPS-18 Cell Line	embryonic stem cell

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