Variant report

Variant	rs73386811
Chromosome Location	chr7:80330415-80330416
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs11574729	0.84[ASN][1000 genomes]
rs11981022	0.86[ASN][1000 genomes]
rs12234771	1.00[EUR][1000 genomes]
rs17154304	0.86[ASN][1000 genomes]
rs17154309	0.86[ASN][1000 genomes]
rs17154312	0.86[ASN][1000 genomes]
rs17154316	0.86[ASN][1000 genomes]
rs17154320	0.86[ASN][1000 genomes]
rs17154324	0.86[ASN][1000 genomes]
rs3211942	0.83[ASN][1000 genomes]
rs3807073	0.83[ASN][1000 genomes]
rs3807075	0.83[ASN][1000 genomes]
rs3807076	0.83[ASN][1000 genomes]
rs3807077	0.83[ASN][1000 genomes]
rs3817556	0.83[ASN][1000 genomes]
rs57969381	0.86[ASN][1000 genomes]
rs6953487	0.83[ASN][1000 genomes]
rs73384976	0.86[ASN][1000 genomes]
rs73384979	0.86[ASN][1000 genomes]
rs73384982	0.86[ASN][1000 genomes]
rs73386822	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv888524	chr7:80107798-80723062	Active TSS Strong transcription Enhancers Genic enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
2	nsv888526	chr7:80240943-80354229	Enhancers Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:80327600-80333200	Enhancers	A549	lung
2	chr7:80328600-80330600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr7:80328600-80333200	Enhancers	NHLF	lung
4	chr7:80328800-80330600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
5	chr7:80328800-80330600	Enhancers	Duodenum Smooth Muscle	Duodenum
6	chr7:80329200-80330600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
7	chr7:80329400-80331200	Weak transcription	HSMM	muscle
8	chr7:80329400-80332400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
9	chr7:80329400-80334200	Weak transcription	Fetal Intestine Small	intestine
10	chr7:80329800-80332400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
11	chr7:80329800-80332600	Weak transcription	Muscle Satellite Cultured Cells	--
12	chr7:80329800-80333000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr7:80329800-80334600	Weak transcription	Monocytes-CD14+_RO01746	blood
14	chr7:80330000-80332400	Weak transcription	Osteobl	bone
15	chr7:80330000-80332600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
16	chr7:80330200-80332400	Weak transcription	NHDF-Ad	bronchial

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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