Variant report

Variant	rs73391160
Chromosome Location	chr6:28700574-28700575
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs11751023	1.00[ASN][1000 genomes]
rs11754275	1.00[ASN][1000 genomes]
rs11754985	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6937342	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73391145	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73391168	1.00[ASN][1000 genomes]
rs73403150	1.00[ASN][1000 genomes]
rs73403152	1.00[ASN][1000 genomes]
rs73403171	1.00[ASN][1000 genomes]
rs73403176	1.00[ASN][1000 genomes]
rs9393925	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv534089	chr6:28636972-28841640	Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:28698000-28701600	Enhancers	K562	blood
2	chr6:28698000-28701800	Weak transcription	HMEC	breast
3	chr6:28698400-28703000	Weak transcription	H9 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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