Variant report

Variant	rs73391807
Chromosome Location	chr8:130458922-130458923
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs56699876	1.00[AMR][1000 genomes]
rs57753030	1.00[AMR][1000 genomes]
rs58395590	1.00[AMR][1000 genomes]
rs73385577	1.00[AMR][1000 genomes]
rs73385584	1.00[AMR][1000 genomes]
rs73387194	1.00[AMR][1000 genomes]
rs73387198	1.00[AMR][1000 genomes]
rs73389888	1.00[AMR][1000 genomes]
rs73391603	1.00[AMR][1000 genomes]
rs73391699	1.00[AMR][1000 genomes]
rs73391825	1.00[AMR][1000 genomes]
rs73391851	1.00[AMR][1000 genomes]
rs73391857	1.00[AMR][1000 genomes]
rs73397786	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv429942	chr8:130397818-130460011	Weak transcription Enhancers Active TSS ZNF genes & repeats Genic enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv1015611	chr8:130449321-130502086	Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130451400-130462000	Weak transcription	Thymus	Thymus
2	chr8:130458200-130459200	Enhancers	Fetal Thymus	thymus
3	chr8:130458600-130459400	Enhancers	Primary monocytes fromperipheralblood	blood
4	chr8:130458600-130459400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
5	chr8:130458600-130459400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr8:130458800-130459000	Enhancers	H9 Cell Line	embryonic stem cell
7	chr8:130458800-130459000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chr8:130458800-130459200	Enhancers	Monocytes-CD14+_RO01746	blood
9	chr8:130458800-130459200	Enhancers	NHEK	skin
10	chr8:130458800-130459400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
11	chr8:130458800-130459400	Transcr. at gene 5' and 3'	K562	blood
12	chr8:130458800-130459600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
13	chr8:130458800-130461600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
14	chr8:130458800-130463400	Enhancers	Dnd41	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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