Variant report

Variant	rs73391851
Chromosome Location	chr8:130475508-130475509
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:7)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

No data

(count:7 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:130473054..130475736-chr8:130477824..130480039,2	K562	blood:
2	chr2:46843956..46844785-chr8:130475357..130476300,2	NB4	blood:
3	chr8:130471335..130473614-chr8:130473626..130476000,2	K562	blood:
4	chr8:130473054..130475813-chr8:130477824..130479965,3	K562	blood:
5	chr8:130474963..130477166-chr8:130482134..130484641,2	K562	blood:
6	chr8:130474372..130477714-chr8:130485477..130488495,3	K562	blood:
7	chr8:130472152..130474277-chr8:130474524..130477153,2	MCF-7	breast:

No data

No data

No data

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs56699876	1.00[AMR][1000 genomes]
rs57753030	1.00[AMR][1000 genomes]
rs58395590	1.00[AMR][1000 genomes]
rs73385577	1.00[AMR][1000 genomes]
rs73385584	1.00[AMR][1000 genomes]
rs73387194	1.00[AMR][1000 genomes]
rs73387198	1.00[AMR][1000 genomes]
rs73389888	1.00[AMR][1000 genomes]
rs73391603	1.00[AMR][1000 genomes]
rs73391699	1.00[AMR][1000 genomes]
rs73391807	1.00[AMR][1000 genomes]
rs73391825	1.00[AMR][1000 genomes]
rs73391857	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73397786	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1015611	chr8:130449321-130502086	Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130473200-130478000	Weak transcription	Dnd41	blood
2	chr8:130474000-130475800	Genic enhancers	K562	blood
3	chr8:130474800-130475800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr8:130475200-130480800	Weak transcription	HSMM	muscle
5	chr8:130475400-130480800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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