Variant report

Variant	rs73402046
Chromosome Location	chr11:8406278-8406279
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:8405491..8409851-chr11:8412424..8416034,4	K562	blood:

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10840032	0.85[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10840033	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10840037	0.80[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10840041	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11041894	0.81[ASN][1000 genomes]
rs11041895	0.81[ASN][1000 genomes]
rs11041896	0.81[ASN][1000 genomes]
rs11041898	0.81[ASN][1000 genomes]
rs11041899	0.81[ASN][1000 genomes]
rs11041912	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12222273	0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12284461	0.94[ASN][1000 genomes]
rs12576010	0.94[ASN][1000 genomes]
rs12576952	0.94[ASN][1000 genomes]
rs2311435	0.98[AFR][1000 genomes];0.99[ASN][1000 genomes]
rs59645839	0.97[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs7929310	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7939568	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs999495	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]

No data

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:8397600-8408200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr11:8398000-8408000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr11:8403000-8407200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
4	chr11:8403600-8407000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr11:8403600-8408000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr11:8404600-8408400	Weak transcription	NHEK	skin
7	chr11:8404800-8408400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
8	chr11:8405000-8408200	Weak transcription	Esophagus	oesophagus
9	chr11:8405800-8406400	Active TSS	Duodenum Mucosa	Duodenum
10	chr11:8406000-8406400	Enhancers	HUES6 Cell Line	embryonic stem cell
11	chr11:8406000-8406400	Active TSS	Monocytes-CD14+_RO01746	blood
12	chr11:8406000-8406600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
13	chr11:8406000-8406600	Enhancers	Fetal Kidney	kidney
14	chr11:8406000-8406600	Enhancers	Fetal Stomach	stomach
15	chr11:8406000-8406600	Flanking Active TSS	K562	blood
16	chr11:8406000-8406800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
17	chr11:8406000-8406800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
18	chr11:8406200-8406400	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
19	chr11:8406200-8406400	Enhancers	Fetal Lung	lung
20	chr11:8406200-8406400	Enhancers	Fetal Thymus	thymus
21	chr11:8406200-8406400	Flanking Active TSS	Stomach Smooth Muscle	stomach
22	chr11:8406200-8406600	Enhancers	Lung	lung
23	chr11:8406200-8408000	Weak transcription	H1 Cell Line	embryonic stem cell
24	chr11:8406200-8408200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
25	chr11:8406200-8408600	Weak transcription	HUES48 Cell Line	embryonic stem cell
26	chr11:8406200-8410600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell

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