Variant report
Variant | rs12222273 |
---|---|
Chromosome Location | chr11:8426463-8426464 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr11:8410429..8412576-chr11:8424308..8426564,3 | K562 | blood: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs1011858 | 0.83[ASN][1000 genomes] |
rs10840032 | 0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs10840033 | 0.83[AMR][1000 genomes];0.99[ASN][1000 genomes] |
rs10840037 | 0.80[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs10840041 | 0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs11041904 | 0.81[ASN][1000 genomes] |
rs11041912 | 0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs12224971 | 0.84[ASN][1000 genomes] |
rs12226334 | 0.83[ASN][1000 genomes] |
rs12284461 | 1.00[ASN][1000 genomes] |
rs12363733 | 0.83[ASN][1000 genomes] |
rs12576010 | 1.00[ASN][1000 genomes] |
rs12576952 | 1.00[ASN][1000 genomes] |
rs2311435 | 0.94[ASN][1000 genomes] |
rs4586148 | 0.83[ASN][1000 genomes] |
rs59645839 | 1.00[ASN][1000 genomes] |
rs73402046 | 0.95[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs7929310 | 0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs7939568 | 0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs999495 | 0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | esv1797209 | chr11:8417452-8474015 | Strong transcription Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS | Chromatin interactive region | n/a | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr11:8424400-8430200 | Weak transcription | Sigmoid Colon | Sigmoid Colon |