Variant report

Variant	rs11041904
Chromosome Location	chr11:8419477-8419478
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 29 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs1011858	0.86[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10840032	0.82[ASN][1000 genomes]
rs10840033	0.80[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs10840034	0.82[ASN][1000 genomes]
rs10840037	0.81[ASN][1000 genomes]
rs10840041	0.81[ASN][1000 genomes]
rs11041894	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11041895	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11041896	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11041898	0.90[ASN][1000 genomes]
rs11041899	0.90[ASN][1000 genomes]
rs11041912	0.81[ASN][1000 genomes]
rs11041913	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11041916	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11041917	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11041925	0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11041927	0.86[ASN][1000 genomes]
rs12222273	0.81[ASN][1000 genomes]
rs12224971	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12226334	0.97[ASN][1000 genomes]
rs12284461	0.81[ASN][1000 genomes]
rs12576010	0.81[ASN][1000 genomes]
rs12576952	0.81[ASN][1000 genomes]
rs2168102	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4586148	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs59645839	0.81[ASN][1000 genomes]
rs7929310	0.81[ASN][1000 genomes]
rs7939568	0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1797209	chr11:8417452-8474015	Strong transcription Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:8418200-8420200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

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