Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs1011858	0.83[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs10840032	1.00[CHB][hapmap];0.85[JPT][hapmap];0.84[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10840037	0.87[CEU][hapmap];0.94[CHB][hapmap];0.84[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10840041	0.87[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs11041904	0.80[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs11041908	0.86[AFR][1000 genomes]
rs11041912	0.87[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs11041927	0.82[CHB][hapmap]
rs12222273	0.83[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs12224971	0.83[CHB][hapmap];0.80[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs12226334	0.84[ASN][1000 genomes]
rs12284461	0.99[ASN][1000 genomes]
rs12363733	0.84[AFR][1000 genomes];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12576010	0.99[ASN][1000 genomes]
rs12576952	0.99[ASN][1000 genomes]
rs2311435	0.94[ASN][1000 genomes]
rs4586148	0.82[CHB][hapmap];0.80[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs59645839	0.99[ASN][1000 genomes]
rs73402046	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7929310	0.87[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs7939568	1.00[CHB][hapmap];0.85[JPT][hapmap];0.87[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs999495	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.95[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1797209	chr11:8417452-8474015	Strong transcription Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:8417200-8418400	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
2	chr11:8417600-8417800	ZNF genes & repeats	Primary hematopoietic stem cells	blood
3	chr11:8417600-8417800	ZNF genes & repeats	Fetal Lung	lung
4	chr11:8417600-8418200	Strong transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
5	chr11:8417600-8418200	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
6	chr11:8417600-8418400	ZNF genes & repeats	H1 Cell Line	embryonic stem cell

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