Variant report

Variant	rs73403168
Chromosome Location	chr6:28747235-28747236
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs11963531	0.94[AFR][1000 genomes];0.94[AMR][1000 genomes]
rs6924860	0.98[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs6929090	0.95[EUR][1000 genomes]
rs73403188	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs73407249	0.86[EUR][1000 genomes]
rs73407250	0.86[EUR][1000 genomes]
rs7763504	0.86[EUR][1000 genomes]
rs9461478	0.94[AFR][1000 genomes];0.94[AMR][1000 genomes]
rs9468420	0.94[AFR][1000 genomes];0.94[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv534089	chr6:28636972-28841640	Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:28746800-28749000	Weak transcription	K562	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
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