The 2.0 version of rSNPBase

Variant report

Variant rs73406029
Chromosome Location chr15:49911063-49911064
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:49895600-49911400 Weak transcription Psoas Muscle Psoas
2 chr15:49896000-49912200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr15:49896600-49912000 Weak transcription Brain Cingulate Gyrus brain
4 chr15:49896800-49912000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr15:49897000-49911400 Weak transcription Stomach Smooth Muscle stomach
6 chr15:49897800-49911800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr15:49898000-49911600 Weak transcription Brain Substantia Nigra brain
8 chr15:49898200-49911400 Weak transcription Pancreas Pancrea
9 chr15:49898200-49911800 Weak transcription Fetal Intestine Large intestine
10 chr15:49898200-49912200 Weak transcription Fetal Stomach stomach
11 chr15:49898200-49912800 Weak transcription Esophagus oesophagus
12 chr15:49898400-49911600 Weak transcription Brain Hippocampus Middle brain
13 chr15:49898400-49912000 Weak transcription Right Ventricle heart
14 chr15:49899000-49912000 Weak transcription Skeletal Muscle Male skeletal muscle
15 chr15:49905000-49912000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr15:49905400-49912000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr15:49906000-49911600 Weak transcription Skeletal Muscle Female skeletal muscle
18 chr15:49906800-49911600 Weak transcription Brain Anterior Caudate brain
19 chr15:49907200-49912000 Weak transcription HUES64 Cell Line embryonic stem cell
20 chr15:49907400-49911200 Weak transcription Duodenum Smooth Muscle Duodenum
21 chr15:49907400-49911600 Weak transcription Colon Smooth Muscle Colon
22 chr15:49907400-49911800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr15:49907400-49911800 Weak transcription Fetal Lung lung
24 chr15:49907400-49912000 Weak transcription Primary T helper cells PMA-I stimulated --
25 chr15:49907400-49912200 Weak transcription Primary T regulatory cells fromperipheralblood blood
26 chr15:49907400-49912200 Weak transcription HSMMtube muscle
27 chr15:49907600-49912000 Weak transcription HSMM muscle
28 chr15:49907600-49912200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
29 chr15:49907600-49912200 Weak transcription Fetal Intestine Small intestine
30 chr15:49907600-49912200 Weak transcription Thymus Thymus
31 chr15:49907800-49911600 Weak transcription Primary T helper naive cells fromperipheralblood blood
32 chr15:49907800-49911800 Weak transcription Primary T cells from cord blood blood
33 chr15:49907800-49912200 Weak transcription Liver Liver
34 chr15:49908800-49911400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
35 chr15:49908800-49912200 Weak transcription Fetal Muscle Leg muscle
36 chr15:49909000-49911800 Weak transcription Primary B cells from cord blood blood
37 chr15:49909200-49911600 Weak transcription Pancreatic Islets Pancreatic Islet
38 chr15:49909400-49911600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr15:49910600-49912200 Enhancers Rectal Smooth Muscle rectum
40 chr15:49910600-49912200 Enhancers HepG2 liver
41 chr15:49910800-49911400 Enhancers K562 blood
42 chr15:49910800-49911600 Enhancers Breast Myoepithelial Primary Cells Breast
43 chr15:49910800-49912000 Enhancers Ovary ovary
44 chr15:49910800-49912200 Enhancers Hela-S3 cervix
45 chr15:49911000-49912000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015