Variant report

Variant	rs73414443
Chromosome Location	chr7:108285014-108285015
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:108284176..108286736-chr7:108287302..108290302,3	K562	blood:
2	chr7:108282952..108288611-chr7:108290383..108294104,5	K562	blood:

Extended variants
information (count: 38 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs10241807	1.00[AMR][1000 genomes]
rs10251373	1.00[AMR][1000 genomes]
rs10257081	1.00[AMR][1000 genomes]
rs57973513	1.00[AMR][1000 genomes]
rs58941051	1.00[AMR][1000 genomes]
rs73412667	1.00[AMR][1000 genomes]
rs73414413	1.00[AMR][1000 genomes]
rs73414414	1.00[AMR][1000 genomes]
rs73414423	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73414428	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73414430	1.00[AMR][1000 genomes]
rs73414432	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73414438	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73414440	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73414445	1.00[AMR][1000 genomes]
rs73416413	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73416415	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73416419	1.00[AMR][1000 genomes]
rs73416423	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73416424	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73416429	1.00[AMR][1000 genomes]
rs73416436	1.00[AMR][1000 genomes]
rs73416438	1.00[AMR][1000 genomes]
rs73416447	1.00[AMR][1000 genomes]
rs73416457	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73416458	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73416464	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73418344	1.00[AMR][1000 genomes]
rs73418346	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73418637	1.00[AMR][1000 genomes]
rs73418638	1.00[AMR][1000 genomes]
rs73422359	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73422361	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73422373	1.00[AMR][1000 genomes]
rs73422378	1.00[AMR][1000 genomes]
rs73422396	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3348839	chr7:107377311-108286538	Weak transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Strong transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	91 gene(s)	inside rSNPs	diseases
2	nsv817371	chr7:108199882-108649799	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	36 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:108282800-108287400	Weak transcription	Fetal Lung	lung
2	chr7:108282800-108288400	Weak transcription	Fetal Stomach	stomach
3	chr7:108283600-108285400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived

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