Variant report

Variant	rs73416457
Chromosome Location	chr7:108323299-108323300
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 45 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:43)

rs_ID	r²[population]
rs10241807	1.00[AMR][1000 genomes]
rs10251373	1.00[AMR][1000 genomes]
rs10257081	1.00[AMR][1000 genomes]
rs55667297	1.00[AMR][1000 genomes]
rs57973513	1.00[AMR][1000 genomes]
rs58941051	1.00[AMR][1000 genomes]
rs59149625	1.00[AMR][1000 genomes]
rs59529271	1.00[AMR][1000 genomes]
rs73412667	1.00[AMR][1000 genomes]
rs73414413	1.00[AMR][1000 genomes]
rs73414414	1.00[AMR][1000 genomes]
rs73414423	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73414428	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73414430	1.00[AMR][1000 genomes]
rs73414432	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73414438	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73414440	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73414443	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73414445	1.00[AMR][1000 genomes]
rs73416413	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73416415	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73416419	1.00[AMR][1000 genomes]
rs73416423	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73416424	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73416429	1.00[AMR][1000 genomes]
rs73416436	1.00[AMR][1000 genomes]
rs73416438	1.00[AMR][1000 genomes]
rs73416447	1.00[AMR][1000 genomes]
rs73416458	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73416464	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73418344	1.00[AMR][1000 genomes]
rs73418346	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73418637	1.00[AMR][1000 genomes]
rs73418638	1.00[AMR][1000 genomes]
rs73418688	1.00[AMR][1000 genomes]
rs73418699	1.00[AMR][1000 genomes]
rs73420509	1.00[AMR][1000 genomes]
rs73420516	1.00[AMR][1000 genomes]
rs73422359	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73422361	1.00[AMR][1000 genomes]
rs73422373	1.00[AMR][1000 genomes]
rs73422378	1.00[AMR][1000 genomes]
rs73422396	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv817371	chr7:108199882-108649799	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
2	nsv1023651	chr7:108303048-108385180	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:108323200-108323800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr7:108323200-108323800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
3	chr7:108323200-108324000	Enhancers	Adipose Nuclei	Adipose
4	chr7:108323200-108324200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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