Variant report

Variant	rs73425840
Chromosome Location	chr7:120385652-120385653
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs10245393	0.97[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10251949	0.86[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs10252574	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10256493	0.82[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs10256716	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10272339	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10487403	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17142964	1.00[ASN][1000 genomes]
rs17142967	1.00[ASN][1000 genomes]
rs17142974	1.00[ASN][1000 genomes]
rs6977602	0.81[ASN][1000 genomes]
rs7777916	0.89[AFR][1000 genomes];0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7795370	0.82[AFR][1000 genomes];0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7806523	0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:120381000-120385800	Weak transcription	Ovary	ovary
2	chr7:120381000-120387000	Weak transcription	Right Atrium	heart
3	chr7:120381200-120391000	Weak transcription	Adipose Nuclei	Adipose
4	chr7:120383200-120386600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr7:120383800-120385800	Weak transcription	H9 Cell Line	embryonic stem cell
6	chr7:120383800-120387000	Weak transcription	H1 Cell Line	embryonic stem cell
7	chr7:120383800-120389000	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr7:120383800-120402800	Weak transcription	Pancreas	Pancrea

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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