Variant report

Variant	rs10245393
Chromosome Location	chr7:120392333-120392334
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 27 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10251949	1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap];0.84[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs10252574	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10256493	0.89[ASW][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];0.94[MKK][hapmap];1.00[TSI][hapmap];0.89[YRI][hapmap];0.84[AFR][1000 genomes];0.80[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10256716	1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap];0.97[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10266090	1.00[GIH][hapmap]
rs10272339	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.97[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10487403	1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1468361	1.00[CHB][hapmap]
rs17142902	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17142908	1.00[CHB][hapmap]
rs17142964	1.00[ASN][1000 genomes]
rs17142967	1.00[ASN][1000 genomes]
rs17142974	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs41424845	1.00[JPT][hapmap]
rs4730974	1.00[JPT][hapmap]
rs6466755	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs6944490	1.00[CHB][hapmap]
rs6975107	1.00[GIH][hapmap]
rs6977602	0.81[ASN][1000 genomes]
rs73425840	0.97[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7777916	0.86[AFR][1000 genomes];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7790895	1.00[JPT][hapmap]
rs7792191	1.00[GIH][hapmap]
rs7795370	0.89[ASW][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];0.82[MEX][hapmap];0.94[MKK][hapmap];0.89[YRI][hapmap];0.84[AFR][1000 genomes];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7806523	0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7807447	1.00[GIH][hapmap]
rs7812111	1.00[JPT][hapmap]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:120383800-120402800	Weak transcription	Pancreas	Pancrea
2	chr7:120391400-120397200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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