Variant report

Variant	rs10266090
Chromosome Location	chr7:120375186-120375187
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10249122	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10256978	0.88[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10279162	0.83[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs11505949	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12539187	0.89[YRI][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28362032	0.88[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs58017683	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60357079	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6975107	1.00[ASW][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];0.85[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs6975419	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7792191	1.00[ASW][hapmap];1.00[GIH][hapmap];0.86[LWK][hapmap];1.00[MEX][hapmap];0.89[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7802580	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7807447	1.00[ASW][hapmap];1.00[GIH][hapmap];0.91[LWK][hapmap];0.89[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:120365000-120380600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
2	chr7:120369800-120377600	Weak transcription	HUES64 Cell Line	embryonic stem cell
3	chr7:120373200-120382400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr7:120373600-120376000	Weak transcription	NHLF	lung
5	chr7:120373800-120376000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
6	chr7:120374200-120376600	Enhancers	Colon Smooth Muscle	Colon
7	chr7:120374200-120380600	Weak transcription	Psoas Muscle	Psoas
8	chr7:120374400-120375400	Enhancers	Rectal Smooth Muscle	rectum
9	chr7:120374400-120375800	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr7:120374800-120376000	Weak transcription	Hela-S3	cervix

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links