Variant report

Variant	rs10256978
Chromosome Location	chr7:120379604-120379605
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:120378952..120380613-chr7:120434028..120436380,2	K562	blood:
2	chr7:120377754..120380696-chr7:120387574..120390011,2	K562	blood:

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10249122	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10266090	0.88[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10279162	0.80[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs11505949	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12539187	1.00[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28362032	0.85[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs58017683	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60357079	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6975107	0.84[YRI][hapmap];0.83[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs6975419	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7792191	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7802580	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7807447	1.00[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:120365000-120380600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
2	chr7:120373200-120382400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr7:120374200-120380600	Weak transcription	Psoas Muscle	Psoas
4	chr7:120375400-120380400	Weak transcription	Rectal Smooth Muscle	rectum
5	chr7:120376200-120380400	Weak transcription	Fetal Lung	lung
6	chr7:120376400-120380400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr7:120376400-120380600	Weak transcription	NHLF	lung
8	chr7:120378000-120379800	Enhancers	iPS-18 Cell Line	embryonic stem cell
9	chr7:120378200-120379800	Enhancers	HUES64 Cell Line	embryonic stem cell
10	chr7:120378200-120379800	Enhancers	iPS-15b Cell Line	embryonic stem cell
11	chr7:120378400-120380600	Weak transcription	H1 Cell Line	embryonic stem cell
12	chr7:120378400-120380600	Enhancers	HUES48 Cell Line	embryonic stem cell
13	chr7:120378400-120380600	Enhancers	Colon Smooth Muscle	Colon
14	chr7:120378800-120380000	Enhancers	ES-WA7 Cell Line	embryonic stem cell
15	chr7:120378800-120380000	Enhancers	Brain Anterior Caudate	brain
16	chr7:120378800-120380600	Enhancers	K562	blood
17	chr7:120378800-120382200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
18	chr7:120379000-120380000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
19	chr7:120379000-120380400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
20	chr7:120379000-120381600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
21	chr7:120379400-120380400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
22	chr7:120379400-120381400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
23	chr7:120379400-120382400	Weak transcription	Cortex derived primary cultured neurospheres	brain
24	chr7:120379600-120381800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
25	chr7:120379600-120382200	Weak transcription	HUES6 Cell Line	embryonic stem cell

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