Variant report

Variant	rs28362032
Chromosome Location	chr7:120376496-120376497
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10249122	0.82[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs10256978	0.85[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs10266090	0.88[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs10279162	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11505949	0.82[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs12539187	0.90[AMR][1000 genomes]
rs58017683	0.85[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs60357079	0.82[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs6975107	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6975419	0.85[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs7792191	0.85[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs7802580	0.90[AMR][1000 genomes]
rs7807447	0.85[AFR][1000 genomes];0.90[AMR][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:120365000-120380600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
2	chr7:120369800-120377600	Weak transcription	HUES64 Cell Line	embryonic stem cell
3	chr7:120373200-120382400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr7:120374200-120376600	Enhancers	Colon Smooth Muscle	Colon
5	chr7:120374200-120380600	Weak transcription	Psoas Muscle	Psoas
6	chr7:120375400-120380400	Weak transcription	Rectal Smooth Muscle	rectum
7	chr7:120375800-120378200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr7:120376200-120376600	Weak transcription	Hela-S3	cervix
9	chr7:120376200-120380400	Weak transcription	Fetal Lung	lung
10	chr7:120376400-120380400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr7:120376400-120380600	Weak transcription	NHLF	lung

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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