Variant report

Variant	rs7807447
Chromosome Location	chr7:120373783-120373784
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10249122	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10256978	1.00[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10266090	1.00[ASW][hapmap];1.00[GIH][hapmap];0.91[LWK][hapmap];0.89[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10279162	0.80[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs11505949	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12539187	1.00[YRI][hapmap];0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28362032	0.85[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs58017683	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60357079	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6975107	1.00[ASW][hapmap];1.00[GIH][hapmap];0.83[LWK][hapmap];0.93[MKK][hapmap];0.85[YRI][hapmap];0.83[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs6975419	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7792191	1.00[ASW][hapmap];1.00[GIH][hapmap];0.95[LWK][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7802580	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:120365000-120380600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
2	chr7:120369800-120377600	Weak transcription	HUES64 Cell Line	embryonic stem cell
3	chr7:120370800-120374400	Weak transcription	Rectal Smooth Muscle	rectum
4	chr7:120371400-120374000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr7:120371600-120373800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
6	chr7:120372600-120373800	Enhancers	Muscle Satellite Cultured Cells	--
7	chr7:120373000-120373800	Enhancers	NH-A	brain
8	chr7:120373200-120373800	Enhancers	Colon Smooth Muscle	Colon
9	chr7:120373200-120382400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
10	chr7:120373400-120373800	Flanking Active TSS	Hela-S3	cervix
11	chr7:120373600-120374000	Weak transcription	Psoas Muscle	Psoas
12	chr7:120373600-120376000	Weak transcription	NHLF	lung

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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