Variant report
| Variant | rs73438552 |
|---|---|
| Chromosome Location | chr6:54974928-54974929 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:1 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr6:54710928..54713066-chr6:54974094..54976437,2 | MCF-7 | breast: |
| No data |
| No data |
| No data |
| Variant related genes | Relation type |
|---|---|
| ENSG00000168143 | Chromatin interaction |
rSNPs within LD-proxies of this variant (count:13)
| rs_ID | r2[population] |
|---|---|
| rs3105260 | 1.00[EUR][1000 genomes] |
| rs57915824 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs58658626 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs59536488 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs59630560 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs6923998 | 1.00[EUR][1000 genomes] |
| rs73434487 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs73438551 | 0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs73438561 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs7356813 | 1.00[EUR][1000 genomes] |
| rs7740224 | 1.00[EUR][1000 genomes] |
| rs7762218 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs7766442 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
